Coexpression cluster: Cluster_593 (HCCA Clusters (HRR 50 & PCC 0.5))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0071454 cellular response to anoxia 50.0% (2/4) 9.3 4e-06 0.000642
GO:0071497 cellular response to freezing 50.0% (2/4) 8.76 8e-06 0.000683
GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway 50.0% (2/4) 7.85 2.8e-05 0.00123
GO:0034059 response to anoxia 50.0% (2/4) 7.85 2.8e-05 0.00123
GO:0010105 negative regulation of ethylene-activated signaling pathway 50.0% (2/4) 7.46 4.8e-05 0.001401
GO:0070298 negative regulation of phosphorelay signal transduction system 50.0% (2/4) 7.46 4.8e-05 0.001401
GO:0010104 regulation of ethylene-activated signaling pathway 50.0% (2/4) 7.0 9.1e-05 0.001999
GO:0070297 regulation of phosphorelay signal transduction system 50.0% (2/4) 7.0 9.1e-05 0.001999
GO:0050826 response to freezing 50.0% (2/4) 6.65 0.000148 0.002886
GO:0002252 immune effector process 50.0% (2/4) 6.57 0.000165 0.002899
GO:0070417 cellular response to cold 50.0% (2/4) 6.44 0.000196 0.003143
GO:0010286 heat acclimation 50.0% (2/4) 6.06 0.000333 0.004879
GO:0009735 response to cytokinin 50.0% (2/4) 5.93 0.000397 0.005369
GO:0036294 cellular response to decreased oxygen levels 50.0% (2/4) 5.83 0.000458 0.005374
GO:0002218 activation of innate immune response 50.0% (2/4) 5.69 0.000552 0.005402
GO:0071456 cellular response to hypoxia 50.0% (2/4) 5.86 0.000437 0.005494
GO:0071453 cellular response to oxygen levels 50.0% (2/4) 5.7 0.000544 0.00563
GO:0009867 jasmonic acid mediated signaling pathway 50.0% (2/4) 5.75 0.000513 0.005638
GO:2000280 regulation of root development 50.0% (2/4) 5.57 0.000653 0.006045
GO:1902532 negative regulation of intracellular signal transduction 50.0% (2/4) 5.51 0.000707 0.006224
GO:0002253 activation of immune response 50.0% (2/4) 5.41 0.000813 0.006812
GO:0045089 positive regulation of innate immune response 50.0% (2/4) 5.25 0.001021 0.006914
GO:0048366 leaf development 50.0% (2/4) 5.26 0.000998 0.007026
GO:0016143 S-glycoside metabolic process 50.0% (2/4) 5.27 0.000982 0.007205
GO:0019757 glycosinolate metabolic process 50.0% (2/4) 5.27 0.000982 0.007205
GO:0019760 glucosinolate metabolic process 50.0% (2/4) 5.27 0.000982 0.007205
GO:0001666 response to hypoxia 50.0% (2/4) 5.05 0.001337 0.008719
GO:0036293 response to decreased oxygen levels 50.0% (2/4) 4.96 0.001509 0.009484
GO:0070482 response to oxygen levels 50.0% (2/4) 4.88 0.00168 0.010196
GO:0010087 phloem or xylem histogenesis 50.0% (2/4) 4.83 0.001803 0.010234
GO:0051301 cell division 50.0% (2/4) 4.86 0.001746 0.010243
GO:0045088 regulation of innate immune response 50.0% (2/4) 4.68 0.002213 0.011455
GO:0050778 positive regulation of immune response 50.0% (2/4) 4.7 0.00215 0.011468
GO:0048827 phyllome development 50.0% (2/4) 4.72 0.002116 0.01164
GO:0002684 positive regulation of immune system process 50.0% (2/4) 4.51 0.002785 0.014003
GO:0031349 positive regulation of defense response 50.0% (2/4) 4.41 0.003231 0.014581
GO:0002833 positive regulation of response to biotic stimulus 50.0% (2/4) 4.44 0.003074 0.014623
GO:0009751 response to salicylic acid 50.0% (2/4) 4.42 0.00319 0.014774
GO:1901657 glycosyl compound metabolic process 50.0% (2/4) 4.45 0.003061 0.014964
GO:0008219 cell death 50.0% (2/4) 4.34 0.00352 0.015488
GO:0032103 positive regulation of response to external stimulus 50.0% (2/4) 4.31 0.003687 0.015828
GO:1902531 regulation of intracellular signal transduction 50.0% (2/4) 4.27 0.003911 0.016389
GO:0009408 response to heat 50.0% (2/4) 4.23 0.004079 0.016697
GO:0006790 sulfur compound metabolic process 50.0% (2/4) 4.1 0.004887 0.019546
GO:0009968 negative regulation of signal transduction 50.0% (2/4) 3.94 0.006077 0.023769
GO:0010648 negative regulation of cell communication 50.0% (2/4) 3.89 0.006495 0.024323
GO:0023057 negative regulation of signaling 50.0% (2/4) 3.89 0.006476 0.024778
GO:0009888 tissue development 50.0% (2/4) 3.81 0.007309 0.026801
GO:0050832 defense response to fungus 50.0% (2/4) 3.76 0.007733 0.027222
GO:0050776 regulation of immune response 50.0% (2/4) 3.76 0.007723 0.02774
GO:1902680 positive regulation of RNA biosynthetic process 50.0% (2/4) 3.39 0.012773 0.035127
GO:0002831 regulation of response to biotic stimulus 50.0% (2/4) 3.55 0.010381 0.035136
GO:0009737 response to abscisic acid 50.0% (2/4) 3.53 0.010635 0.035318
GO:0001067 transcription regulatory region nucleic acid binding 50.0% (2/4) 3.33 0.013855 0.035341
GO:0032101 regulation of response to external stimulus 50.0% (2/4) 3.35 0.013527 0.035532
GO:0009409 response to cold 50.0% (2/4) 3.51 0.010905 0.035542
GO:0009414 response to water deprivation 50.0% (2/4) 3.46 0.01172 0.035564
GO:1903508 positive regulation of nucleic acid-templated transcription 50.0% (2/4) 3.39 0.012747 0.03561
GO:0000976 transcription cis-regulatory region binding 50.0% (2/4) 3.34 0.013759 0.035612
GO:1990837 sequence-specific double-stranded DNA binding 50.0% (2/4) 3.3 0.014384 0.035655
GO:0097305 response to alcohol 50.0% (2/4) 3.36 0.013377 0.035672
GO:0001101 response to acid chemical 50.0% (2/4) 3.31 0.014188 0.035672
GO:0002682 regulation of immune system process 50.0% (2/4) 3.55 0.010345 0.0357
GO:0003700 DNA-binding transcription factor activity 50.0% (2/4) 3.49 0.011215 0.035888
GO:0019748 secondary metabolic process 50.0% (2/4) 3.36 0.013269 0.035928
GO:0031347 regulation of defense response 50.0% (2/4) 3.28 0.014907 0.035939
GO:0014070 response to organic cyclic compound 50.0% (2/4) 3.28 0.014736 0.036021
GO:0002376 immune system process 50.0% (2/4) 3.43 0.012079 0.036033
GO:1901135 carbohydrate derivative metabolic process 50.0% (2/4) 3.46 0.011694 0.036109
GO:0009651 response to salt stress 50.0% (2/4) 3.39 0.01272 0.03611
GO:0009755 hormone-mediated signaling pathway 50.0% (2/4) 3.46 0.011605 0.036474
GO:0009415 response to water 50.0% (2/4) 3.4 0.012681 0.036587
GO:0045893 positive regulation of DNA-templated transcription 50.0% (2/4) 3.41 0.012523 0.036733
GO:0051254 positive regulation of RNA metabolic process 50.0% (2/4) 3.24 0.015554 0.036994
GO:0099402 plant organ development 50.0% (2/4) 3.22 0.015964 0.037462
GO:0140110 transcription regulator activity 50.0% (2/4) 3.21 0.016334 0.037825
GO:0010557 positive regulation of macromolecule biosynthetic process 50.0% (2/4) 3.18 0.017024 0.038413
GO:0003690 double-stranded DNA binding 50.0% (2/4) 3.19 0.016812 0.038428
GO:0009620 response to fungus 50.0% (2/4) 3.13 0.018131 0.039396
GO:0006970 response to osmotic stress 50.0% (2/4) 3.11 0.018491 0.039688
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 50.0% (2/4) 3.13 0.0181 0.039819
GO:0048585 negative regulation of response to stimulus 50.0% (2/4) 3.14 0.017975 0.040046
GO:0043565 sequence-specific DNA binding 50.0% (2/4) 3.06 0.019997 0.042404
GO:0031328 positive regulation of cellular biosynthetic process 50.0% (2/4) 3.0 0.021557 0.045167
GO:0009891 positive regulation of biosynthetic process 50.0% (2/4) 2.97 0.022288 0.04615
GO:0009266 response to temperature stimulus 50.0% (2/4) 2.96 0.022787 0.046635
GO:0048584 positive regulation of response to stimulus 50.0% (2/4) 2.94 0.023152 0.046836
GO:0043436 oxoacid metabolic process 50.0% (2/4) 2.88 0.025231 0.049896
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (4) (download table)

InterPro Domains

GO Terms

Family Terms