Coexpression cluster: Cluster_419 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0010086 embryonic root morphogenesis 100.0% (2/2) 11.93 0.0 5e-06
GO:0010476 gibberellin mediated signaling pathway 100.0% (2/2) 7.79 2e-05 0.000262
GO:0080113 regulation of seed growth 100.0% (2/2) 8.57 7e-06 0.000265
GO:0009742 brassinosteroid mediated signaling pathway 100.0% (2/2) 7.88 1.8e-05 0.000276
GO:0043401 steroid hormone mediated signaling pathway 100.0% (2/2) 7.51 3e-05 0.000328
GO:0009740 gibberellic acid mediated signaling pathway 100.0% (2/2) 7.9 1.7e-05 0.000337
GO:0009640 photomorphogenesis 100.0% (2/2) 7.97 1.6e-05 0.000406
GO:0048506 regulation of timing of meristematic phase transition 100.0% (2/2) 7.08 5.4e-05 0.000463
GO:0048510 regulation of timing of transition from vegetative to reproductive phase 100.0% (2/2) 7.08 5.4e-05 0.000463
GO:0040034 regulation of development, heterochronic 100.0% (2/2) 6.94 6.6e-05 0.000511
GO:0048598 embryonic morphogenesis 100.0% (2/2) 6.84 7.6e-05 0.000531
GO:0048509 regulation of meristem development 100.0% (2/2) 6.75 8.6e-05 0.000552
GO:0010015 root morphogenesis 100.0% (2/2) 6.67 9.7e-05 0.000573
GO:0009639 response to red or far red light 100.0% (2/2) 5.82 0.000311 0.001711
GO:1905392 plant organ morphogenesis 100.0% (2/2) 5.57 0.000444 0.002279
GO:0009826 unidimensional cell growth 100.0% (2/2) 5.12 0.000828 0.003983
GO:0048638 regulation of developmental growth 100.0% (2/2) 5.03 0.000935 0.004237
GO:0060560 developmental growth involved in morphogenesis 100.0% (2/2) 4.74 0.001398 0.005981
GO:0040008 regulation of growth 100.0% (2/2) 4.42 0.002196 0.006261
GO:0048589 developmental growth 100.0% (2/2) 4.44 0.002115 0.006263
GO:0046983 protein dimerization activity 100.0% (2/2) 4.63 0.001633 0.006287
GO:0009755 hormone-mediated signaling pathway 100.0% (2/2) 4.46 0.002056 0.006334
GO:0001067 transcription regulatory region nucleic acid binding 100.0% (2/2) 4.33 0.00247 0.006558
GO:2000241 regulation of reproductive process 100.0% (2/2) 4.46 0.002052 0.006583
GO:1990837 sequence-specific double-stranded DNA binding 100.0% (2/2) 4.3 0.002567 0.006589
GO:0000902 cell morphogenesis 100.0% (2/2) 4.63 0.001631 0.006609
GO:0003700 DNA-binding transcription factor activity 100.0% (2/2) 4.49 0.001985 0.006646
GO:0016049 cell growth 100.0% (2/2) 4.55 0.00182 0.006673
GO:0005773 vacuole 100.0% (2/2) 4.52 0.001908 0.006679
GO:0000976 transcription cis-regulatory region binding 100.0% (2/2) 4.34 0.002452 0.006743
GO:0003690 double-stranded DNA binding 100.0% (2/2) 4.19 0.003018 0.006836
GO:0009791 post-embryonic development 100.0% (2/2) 4.2 0.002949 0.00688
GO:0140110 transcription regulator activity 100.0% (2/2) 4.21 0.002929 0.007048
GO:0040007 growth 100.0% (2/2) 4.21 0.002907 0.007221
GO:0043565 sequence-specific DNA binding 100.0% (2/2) 4.06 0.003616 0.007955
GO:0009416 response to light stimulus 100.0% (2/2) 3.75 0.00556 0.011892
GO:0009314 response to radiation 100.0% (2/2) 3.68 0.006099 0.012692
GO:0003677 DNA binding 100.0% (2/2) 3.57 0.00713 0.014447
GO:2001141 regulation of RNA biosynthetic process 100.0% (2/2) 3.47 0.008154 0.014948
GO:1903506 regulation of nucleic acid-templated transcription 100.0% (2/2) 3.47 0.008144 0.015296
GO:0006355 regulation of DNA-templated transcription 100.0% (2/2) 3.47 0.008098 0.015589
GO:0009653 anatomical structure morphogenesis 100.0% (2/2) 3.49 0.00792 0.015636
GO:0051252 regulation of RNA metabolic process 100.0% (2/2) 3.34 0.009805 0.017558
GO:0007165 signal transduction 100.0% (2/2) 3.26 0.010866 0.019016
GO:0019219 regulation of nucleobase-containing compound metabolic process 100.0% (2/2) 3.22 0.011593 0.019405
GO:0010556 regulation of macromolecule biosynthetic process 100.0% (2/2) 3.23 0.011368 0.019452
GO:0050793 regulation of developmental process 100.0% (2/2) 3.18 0.012229 0.020035
GO:0031326 regulation of cellular biosynthetic process 100.0% (2/2) 3.01 0.015348 0.024621
GO:0010468 regulation of gene expression 100.0% (2/2) 2.96 0.016399 0.025255
GO:0009889 regulation of biosynthetic process 100.0% (2/2) 2.97 0.016366 0.025719
GO:0005634 nucleus 100.0% (2/2) 2.81 0.020296 0.030642
GO:0051171 regulation of nitrogen compound metabolic process 100.0% (2/2) 2.78 0.02118 0.030771
GO:0003676 nucleic acid binding 100.0% (2/2) 2.78 0.021157 0.031329
GO:0080090 regulation of primary metabolic process 100.0% (2/2) 2.69 0.024112 0.034382
GO:0060255 regulation of macromolecule metabolic process 100.0% (2/2) 2.66 0.024978 0.034969
GO:0031323 regulation of cellular metabolic process 100.0% (2/2) 2.62 0.026604 0.036581
GO:0032501 multicellular organismal process 100.0% (2/2) 2.47 0.032398 0.043765
GO:0019222 regulation of metabolic process 100.0% (2/2) 2.38 0.036999 0.048286
GO:0009628 response to abiotic stimulus 100.0% (2/2) 2.38 0.036714 0.048741
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

Family Terms