Coexpression cluster: Cluster_674 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034660 ncRNA metabolic process 100.0% (3/3) 5.2 2e-05 0.004405
GO:0005685 U1 snRNP 33.33% (1/3) 9.03 0.001918 0.016152
GO:0017070 U6 snRNA binding 33.33% (1/3) 9.03 0.001918 0.016152
GO:0000418 RNA polymerase IV complex 33.33% (1/3) 9.03 0.001918 0.016152
GO:0034641 cellular nitrogen compound metabolic process 100.0% (3/3) 2.87 0.002534 0.016323
GO:0046483 heterocycle metabolic process 100.0% (3/3) 2.92 0.002282 0.016658
GO:0006383 transcription by RNA polymerase III 33.33% (1/3) 8.63 0.002531 0.016794
GO:0005665 RNA polymerase II, core complex 33.33% (1/3) 8.67 0.002454 0.016795
GO:0005682 U5 snRNP 33.33% (1/3) 8.91 0.002071 0.016797
GO:1990904 ribonucleoprotein complex 66.67% (2/3) 4.55 0.002397 0.016933
GO:1990234 transferase complex 66.67% (2/3) 4.59 0.002258 0.017056
GO:0006360 transcription by RNA polymerase I 33.33% (1/3) 8.81 0.002224 0.017396
GO:0030218 erythrocyte differentiation 33.33% (1/3) 8.18 0.00345 0.01757
GO:0051216 cartilage development 33.33% (1/3) 9.21 0.001688 0.017599
GO:0009304 tRNA transcription 33.33% (1/3) 9.28 0.001611 0.01764
GO:0005730 nucleolus 66.67% (2/3) 4.26 0.003545 0.017645
GO:0042797 tRNA transcription by RNA polymerase III 33.33% (1/3) 9.35 0.001534 0.017684
GO:0005689 U12-type spliceosomal complex 33.33% (1/3) 8.42 0.002914 0.017725
GO:0000419 RNA polymerase V complex 33.33% (1/3) 8.46 0.002837 0.017752
GO:0016072 rRNA metabolic process 66.67% (2/3) 5.83 0.000408 0.017861
GO:0006725 cellular aromatic compound metabolic process 100.0% (3/3) 2.73 0.003432 0.017897
GO:0032991 protein-containing complex 100.0% (3/3) 3.02 0.001888 0.017978
GO:0071004 U2-type prespliceosome 33.33% (1/3) 8.21 0.003373 0.018018
GO:0071010 prespliceosome 33.33% (1/3) 8.21 0.003373 0.018018
GO:0071493 cellular response to UV-B 33.33% (1/3) 8.31 0.003144 0.018117
GO:0005732 sno(s)RNA-containing ribonucleoprotein complex 33.33% (1/3) 8.31 0.003144 0.018117
GO:0034470 ncRNA processing 66.67% (2/3) 4.89 0.001493 0.018162
GO:0005666 RNA polymerase III complex 33.33% (1/3) 9.08 0.001841 0.018325
GO:0006364 rRNA processing 66.67% (2/3) 5.97 0.000335 0.01834
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 33.33% (1/3) 8.24 0.003297 0.018512
GO:1901360 organic cyclic compound metabolic process 100.0% (3/3) 2.6 0.004502 0.018602
GO:0071007 U2-type catalytic step 2 spliceosome 33.33% (1/3) 7.76 0.004598 0.018648
GO:1990726 Lsm1-7-Pat1 complex 33.33% (1/3) 10.35 0.000767 0.018672
GO:0048703 embryonic viscerocranium morphogenesis 33.33% (1/3) 10.35 0.000767 0.018672
GO:0005688 U6 snRNP 33.33% (1/3) 9.42 0.001458 0.018777
GO:0034709 methylosome 33.33% (1/3) 9.42 0.001458 0.018777
GO:0005736 RNA polymerase I complex 33.33% (1/3) 9.42 0.001458 0.018777
GO:0009059 macromolecule biosynthetic process 66.67% (2/3) 4.09 0.004497 0.018939
GO:0045292 mRNA cis splicing, via spliceosome 33.33% (1/3) 7.81 0.004445 0.019087
GO:0098781 ncRNA transcription 33.33% (1/3) 7.81 0.004445 0.019087
GO:1905323 telomerase holoenzyme complex assembly 33.33% (1/3) 10.67 0.000614 0.019206
GO:0030687 preribosome, large subunit precursor 33.33% (1/3) 7.84 0.004368 0.019524
GO:0006366 transcription by RNA polymerase II 33.33% (1/3) 7.84 0.004368 0.019524
GO:0000470 maturation of LSU-rRNA 33.33% (1/3) 7.67 0.004904 0.019527
GO:0097526 spliceosomal tri-snRNP complex 33.33% (1/3) 7.91 0.004139 0.019705
GO:0140513 nuclear protein-containing complex 66.67% (2/3) 4.13 0.004229 0.019705
GO:0046540 U4/U6 x U5 tri-snRNP complex 33.33% (1/3) 7.94 0.004062 0.01977
GO:0017069 snRNA binding 33.33% (1/3) 7.63 0.005057 0.019777
GO:0001054 RNA polymerase I activity 33.33% (1/3) 10.08 0.000921 0.020164
GO:0003729 mRNA binding 66.67% (2/3) 3.96 0.005317 0.020429
GO:0090304 nucleic acid metabolic process 100.0% (3/3) 3.6 0.000561 0.020463
GO:0055029 nuclear DNA-directed RNA polymerase complex 33.33% (1/3) 7.5 0.005516 0.020474
GO:0006139 nucleobase-containing compound metabolic process 100.0% (3/3) 3.31 0.001029 0.020485
GO:0006396 RNA processing 66.67% (2/3) 3.95 0.005443 0.020554
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 33.33% (1/3) 7.46 0.005669 0.020691
GO:0034719 SMN-Sm protein complex 33.33% (1/3) 9.76 0.001151 0.021003
GO:0001056 RNA polymerase III activity 33.33% (1/3) 9.5 0.001381 0.021601
GO:0120115 Lsm2-8 complex 33.33% (1/3) 9.58 0.001304 0.021971
GO:0030275 LRR domain binding 33.33% (1/3) 11.67 0.000307 0.022409
GO:0071005 U2-type precatalytic spliceosome 33.33% (1/3) 7.31 0.00628 0.022548
GO:0098554 cytoplasmic side of endoplasmic reticulum membrane 33.33% (1/3) 7.21 0.006739 0.022705
GO:0034062 5'-3' RNA polymerase activity 33.33% (1/3) 7.28 0.006433 0.022724
GO:1902494 catalytic complex 66.67% (2/3) 3.78 0.006862 0.022771
GO:0097747 RNA polymerase activity 33.33% (1/3) 7.23 0.006663 0.022798
GO:0098556 cytoplasmic side of rough endoplasmic reticulum membrane 33.33% (1/3) 7.24 0.006586 0.022895
GO:0071011 precatalytic spliceosome 33.33% (1/3) 7.11 0.007197 0.02318
GO:0016070 RNA metabolic process 100.0% (3/3) 4.07 0.000212 0.023254
GO:0000428 DNA-directed RNA polymerase complex 33.33% (1/3) 7.08 0.00735 0.023329
GO:0044271 cellular nitrogen compound biosynthetic process 66.67% (2/3) 3.75 0.007157 0.023392
GO:0008187 poly-pyrimidine tract binding 33.33% (1/3) 6.96 0.008037 0.023469
GO:0030490 maturation of SSU-rRNA 33.33% (1/3) 6.96 0.008037 0.023469
GO:0030880 RNA polymerase complex 33.33% (1/3) 6.96 0.008037 0.023469
GO:0042254 ribosome biogenesis 33.33% (1/3) 6.96 0.008037 0.023469
GO:0008266 poly(U) RNA binding 33.33% (1/3) 7.01 0.007732 0.023849
GO:0097525 spliceosomal snRNP complex 33.33% (1/3) 7.01 0.007732 0.023849
GO:0030532 small nuclear ribonucleoprotein complex 33.33% (1/3) 6.88 0.008495 0.02448
GO:0120114 Sm-like protein family complex 33.33% (1/3) 6.84 0.008724 0.024813
GO:0030099 myeloid cell differentiation 33.33% (1/3) 6.75 0.009258 0.025994
GO:0034644 cellular response to UV 33.33% (1/3) 6.6 0.01025 0.028413
GO:0071013 catalytic step 2 spliceosome 33.33% (1/3) 6.5 0.011012 0.030144
GO:0043170 macromolecule metabolic process 100.0% (3/3) 2.16 0.011184 0.030237
GO:0030684 preribosome 33.33% (1/3) 6.45 0.011392 0.030426
GO:0005684 U2-type spliceosomal complex 33.33% (1/3) 6.39 0.011849 0.03053
GO:0034708 methyltransferase complex 33.33% (1/3) 6.4 0.011773 0.030695
GO:0022613 ribonucleoprotein complex biogenesis 33.33% (1/3) 6.33 0.012382 0.030815
GO:0003723 RNA binding 66.67% (2/3) 3.36 0.012115 0.030851
GO:0000956 nuclear-transcribed mRNA catabolic process 33.33% (1/3) 6.41 0.011697 0.030864
GO:0098562 cytoplasmic side of membrane 33.33% (1/3) 6.34 0.012306 0.030978
GO:0006402 mRNA catabolic process 33.33% (1/3) 6.11 0.01436 0.035335
GO:0000398 mRNA splicing, via spliceosome 33.33% (1/3) 6.08 0.01474 0.035868
GO:0043009 chordate embryonic development 33.33% (1/3) 6.05 0.014968 0.036022
GO:0006351 DNA-templated transcription 33.33% (1/3) 5.99 0.015652 0.036857
GO:0022625 cytosolic large ribosomal subunit 33.33% (1/3) 6.0 0.0155 0.036896
GO:0097659 nucleic acid-templated transcription 33.33% (1/3) 5.96 0.016031 0.03735
GO:0016779 nucleotidyltransferase activity 33.33% (1/3) 5.93 0.016259 0.037482
GO:0043021 ribonucleoprotein complex binding 33.33% (1/3) 5.82 0.017625 0.040207
GO:0002181 cytoplasmic translation 33.33% (1/3) 5.73 0.018687 0.040518
GO:0000375 RNA splicing, via transesterification reactions 33.33% (1/3) 5.73 0.018687 0.040518
GO:0006401 RNA catabolic process 33.33% (1/3) 5.79 0.018004 0.040649
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 33.33% (1/3) 5.77 0.018232 0.040742
GO:0015934 large ribosomal subunit 33.33% (1/3) 5.75 0.018459 0.040834
GO:0003727 single-stranded RNA binding 33.33% (1/3) 5.69 0.019293 0.041423
GO:0098552 side of membrane 33.33% (1/3) 5.56 0.02111 0.044884
GO:0043228 non-membrane-bounded organelle 66.67% (2/3) 2.92 0.022015 0.045059
GO:0043232 intracellular non-membrane-bounded organelle 66.67% (2/3) 2.92 0.022015 0.045059
GO:0006807 nitrogen compound metabolic process 100.0% (3/3) 1.84 0.021806 0.045481
GO:0044260 cellular macromolecule metabolic process 66.67% (2/3) 2.93 0.021707 0.04571
GO:0061695 transferase complex, transferring phosphorus-containing groups 33.33% (1/3) 5.44 0.022849 0.046333
GO:0005681 spliceosomal complex 33.33% (1/3) 5.38 0.023831 0.047446
GO:0046982 protein heterodimerization activity 33.33% (1/3) 5.38 0.023831 0.047446
GO:0009792 embryo development ending in birth or egg hatching 33.33% (1/3) 5.37 0.024058 0.047466
GO:0022618 ribonucleoprotein complex assembly 33.33% (1/3) 5.28 0.025492 0.049846
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (3) (download table)

InterPro Domains

GO Terms

Family Terms