Coexpression cluster: Cluster_675 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0090400 stress-induced premature senescence 100.0% (2/2) 11.08 0.0 1.4e-05
GO:1904248 regulation of age-related resistance 100.0% (2/2) 11.08 0.0 1.4e-05
GO:1904250 positive regulation of age-related resistance 100.0% (2/2) 11.08 0.0 1.4e-05
GO:0090709 regulation of timing of plant organ formation 100.0% (2/2) 10.73 0.0 1.7e-05
GO:0090398 cellular senescence 100.0% (2/2) 10.3 1e-06 2.5e-05
GO:0010072 primary shoot apical meristem specification 100.0% (2/2) 9.73 1e-06 4.7e-05
GO:2000014 regulation of endosperm development 100.0% (2/2) 9.58 2e-06 4.9e-05
GO:0051782 negative regulation of cell division 100.0% (2/2) 9.28 3e-06 6.6e-05
GO:0010199 organ boundary specification between lateral organs and the meristem 100.0% (2/2) 9.19 3e-06 6.6e-05
GO:0090421 embryonic meristem initiation 100.0% (2/2) 9.06 3e-06 7.1e-05
GO:0080187 floral organ senescence 100.0% (2/2) 8.8 5e-06 9.4e-05
GO:0010223 secondary shoot formation 100.0% (2/2) 8.58 7e-06 0.000107
GO:0010346 shoot axis formation 100.0% (2/2) 8.58 7e-06 0.000107
GO:0010014 meristem initiation 100.0% (2/2) 8.51 7e-06 0.000109
GO:0051091 positive regulation of DNA-binding transcription factor activity 100.0% (2/2) 8.41 9e-06 0.000118
GO:0048859 formation of anatomical boundary 100.0% (2/2) 8.3 1e-05 0.000121
GO:0090691 formation of plant organ boundary 100.0% (2/2) 8.34 1e-05 0.000122
GO:0001763 morphogenesis of a branching structure 100.0% (2/2) 8.14 1.3e-05 0.000144
GO:1905428 regulation of plant organ formation 100.0% (2/2) 8.01 1.5e-05 0.000163
GO:1900057 positive regulation of leaf senescence 100.0% (2/2) 7.86 1.8e-05 0.000189
GO:1902074 response to salt 100.0% (2/2) 7.78 2.1e-05 0.000202
GO:0051090 regulation of DNA-binding transcription factor activity 100.0% (2/2) 7.4 3.5e-05 0.000326
GO:1900055 regulation of leaf senescence 100.0% (2/2) 7.06 5.6e-05 0.000502
GO:0040034 regulation of development, heterochronic 100.0% (2/2) 6.94 6.6e-05 0.00057
GO:0048527 lateral root development 100.0% (2/2) 6.82 7.8e-05 0.00064
GO:0048528 post-embryonic root development 100.0% (2/2) 6.73 8.9e-05 0.000704
GO:0090696 post-embryonic plant organ development 100.0% (2/2) 6.65 9.9e-05 0.000754
GO:0042542 response to hydrogen peroxide 100.0% (2/2) 6.59 0.000107 0.000761
GO:0009734 auxin-activated signaling pathway 100.0% (2/2) 6.55 0.000114 0.00078
GO:0051302 regulation of cell division 100.0% (2/2) 6.6 0.000106 0.00078
GO:0043068 positive regulation of programmed cell death 100.0% (2/2) 6.42 0.000135 0.000898
GO:0010029 regulation of seed germination 100.0% (2/2) 6.29 0.000163 0.001047
GO:0045089 positive regulation of innate immune response 100.0% (2/2) 6.25 0.000173 0.001082
GO:1900140 regulation of seedling development 100.0% (2/2) 6.16 0.000195 0.001119
GO:0010942 positive regulation of cell death 100.0% (2/2) 6.19 0.000188 0.001141
GO:1905393 plant organ formation 100.0% (2/2) 6.16 0.000194 0.001142
GO:0009723 response to ethylene 100.0% (2/2) 5.98 0.00025 0.00139
GO:0090693 plant organ senescence 100.0% (2/2) 5.75 0.000346 0.001878
GO:0050778 positive regulation of immune response 100.0% (2/2) 5.7 0.000368 0.001942
GO:0045088 regulation of innate immune response 100.0% (2/2) 5.68 0.000379 0.00195
GO:0000302 response to reactive oxygen species 100.0% (2/2) 5.65 0.000399 0.002003
GO:0044093 positive regulation of molecular function 100.0% (2/2) 5.57 0.000442 0.002166
GO:0002684 positive regulation of immune system process 100.0% (2/2) 5.51 0.000478 0.00229
GO:0002833 positive regulation of response to biotic stimulus 100.0% (2/2) 5.44 0.000528 0.002474
GO:0031349 positive regulation of defense response 100.0% (2/2) 5.41 0.000556 0.002544
GO:0032103 positive regulation of response to external stimulus 100.0% (2/2) 5.31 0.000636 0.002847
GO:0043067 regulation of programmed cell death 100.0% (2/2) 5.15 0.000797 0.003493
GO:0022603 regulation of anatomical structure morphogenesis 100.0% (2/2) 5.12 0.000825 0.003539
GO:0048364 root development 100.0% (2/2) 5.07 0.000889 0.003738
GO:0042803 protein homodimerization activity 100.0% (2/2) 5.02 0.00095 0.003912
GO:0010941 regulation of cell death 100.0% (2/2) 4.89 0.001131 0.004568
GO:0051094 positive regulation of developmental process 100.0% (2/2) 4.81 0.001264 0.005006
GO:0050776 regulation of immune response 100.0% (2/2) 4.76 0.001353 0.005257
GO:0048646 anatomical structure formation involved in morphogenesis 100.0% (2/2) 4.71 0.001452 0.00554
GO:0046983 protein dimerization activity 100.0% (2/2) 4.63 0.001633 0.005901
GO:0090059 protoxylem development 50.0% (1/2) 9.3 0.001586 0.005939
GO:0006979 response to oxidative stress 100.0% (2/2) 4.63 0.001629 0.005992
GO:1902680 positive regulation of RNA biosynthetic process 100.0% (2/2) 4.39 0.00227 0.006321
GO:0009414 response to water deprivation 100.0% (2/2) 4.46 0.002077 0.006387
GO:1903508 positive regulation of nucleic acid-templated transcription 100.0% (2/2) 4.39 0.002266 0.006393
GO:0002831 regulation of response to biotic stimulus 100.0% (2/2) 4.55 0.001833 0.0064
GO:0048580 regulation of post-embryonic development 100.0% (2/2) 4.52 0.001899 0.006414
GO:0009755 hormone-mediated signaling pathway 100.0% (2/2) 4.46 0.002056 0.006418
GO:0009737 response to abscisic acid 100.0% (2/2) 4.53 0.001879 0.006452
GO:0009651 response to salt stress 100.0% (2/2) 4.39 0.002261 0.006468
GO:0002682 regulation of immune system process 100.0% (2/2) 4.55 0.001826 0.006487
GO:0005783 endoplasmic reticulum 100.0% (2/2) 4.49 0.001987 0.006498
GO:2000241 regulation of reproductive process 100.0% (2/2) 4.46 0.002052 0.006502
GO:0001067 transcription regulatory region nucleic acid binding 100.0% (2/2) 4.33 0.00247 0.006523
GO:0032101 regulation of response to external stimulus 100.0% (2/2) 4.35 0.002409 0.00653
GO:0009415 response to water 100.0% (2/2) 4.4 0.002253 0.006538
GO:0097305 response to alcohol 100.0% (2/2) 4.36 0.002382 0.006541
GO:0000976 transcription cis-regulatory region binding 100.0% (2/2) 4.34 0.002452 0.00656
GO:0048759 xylem vessel member cell differentiation 50.0% (1/2) 8.93 0.002046 0.006584
GO:0003700 DNA-binding transcription factor activity 100.0% (2/2) 4.49 0.001985 0.006595
GO:0001101 response to acid chemical 100.0% (2/2) 4.31 0.002531 0.0066
GO:1990837 sequence-specific double-stranded DNA binding 100.0% (2/2) 4.3 0.002567 0.006611
GO:1901348 positive regulation of secondary cell wall biogenesis 50.0% (1/2) 8.8 0.00225 0.006622
GO:1903340 positive regulation of cell wall organization or biogenesis 50.0% (1/2) 8.8 0.00225 0.006622
GO:0048829 root cap development 50.0% (1/2) 8.53 0.00271 0.006726
GO:0045893 positive regulation of DNA-templated transcription 100.0% (2/2) 4.41 0.002224 0.006739
GO:0065009 regulation of molecular function 100.0% (2/2) 4.27 0.002688 0.006753
GO:0031347 regulation of defense response 100.0% (2/2) 4.28 0.002664 0.006775
GO:0051254 positive regulation of RNA metabolic process 100.0% (2/2) 4.24 0.002784 0.006828
GO:0099402 plant organ development 100.0% (2/2) 4.22 0.00286 0.006932
GO:0009791 post-embryonic development 100.0% (2/2) 4.2 0.002949 0.006982
GO:0010557 positive regulation of macromolecule biosynthetic process 100.0% (2/2) 4.18 0.003058 0.006999
GO:2000026 regulation of multicellular organismal development 100.0% (2/2) 4.18 0.003027 0.007006
GO:0140110 transcription regulator activity 100.0% (2/2) 4.21 0.002929 0.007016
GO:0003690 double-stranded DNA binding 100.0% (2/2) 4.19 0.003018 0.007066
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 100.0% (2/2) 4.13 0.003259 0.007378
GO:0006970 response to osmotic stress 100.0% (2/2) 4.11 0.003333 0.007462
GO:0043565 sequence-specific DNA binding 100.0% (2/2) 4.06 0.003616 0.00801
GO:0031328 positive regulation of cellular biosynthetic process 100.0% (2/2) 4.0 0.003911 0.008571
GO:0009891 positive regulation of biosynthetic process 100.0% (2/2) 3.97 0.00405 0.008782
GO:0048584 positive regulation of response to stimulus 100.0% (2/2) 3.94 0.004214 0.009043
GO:1905177 tracheary element differentiation 50.0% (1/2) 7.85 0.004344 0.009226
GO:0042802 identical protein binding 100.0% (2/2) 3.7 0.005928 0.012461
GO:0051173 positive regulation of nitrogen compound metabolic process 100.0% (2/2) 3.68 0.006051 0.012591
GO:0080134 regulation of response to stress 100.0% (2/2) 3.65 0.006316 0.013012
GO:0051239 regulation of multicellular organismal process 100.0% (2/2) 3.64 0.006451 0.013158
GO:0031325 positive regulation of cellular metabolic process 100.0% (2/2) 3.59 0.006856 0.013847
GO:0010604 positive regulation of macromolecule metabolic process 100.0% (2/2) 3.58 0.007009 0.014019
GO:0003677 DNA binding 100.0% (2/2) 3.57 0.00713 0.014123
GO:1990110 callus formation 50.0% (1/2) 7.02 0.007711 0.015129
GO:2001141 regulation of RNA biosynthetic process 100.0% (2/2) 3.47 0.008154 0.015132
GO:0033993 response to lipid 100.0% (2/2) 3.5 0.007806 0.015171
GO:0045491 xylan metabolic process 50.0% (1/2) 6.97 0.007966 0.015195
GO:0009653 anatomical structure morphogenesis 100.0% (2/2) 3.49 0.00792 0.015247
GO:1903506 regulation of nucleic acid-templated transcription 100.0% (2/2) 3.47 0.008144 0.015252
GO:0006355 regulation of DNA-templated transcription 100.0% (2/2) 3.47 0.008098 0.015305
GO:0009893 positive regulation of metabolic process 100.0% (2/2) 3.37 0.00929 0.017088
GO:0010035 response to inorganic substance 100.0% (2/2) 3.35 0.009659 0.017454
GO:2000652 regulation of secondary cell wall biogenesis 50.0% (1/2) 6.7 0.009596 0.017494
GO:0051252 regulation of RNA metabolic process 100.0% (2/2) 3.34 0.009805 0.017564
GO:0007165 signal transduction 100.0% (2/2) 3.26 0.010866 0.019297
GO:0010556 regulation of macromolecule biosynthetic process 100.0% (2/2) 3.23 0.011368 0.020015
GO:0019219 regulation of nucleobase-containing compound metabolic process 100.0% (2/2) 3.22 0.011593 0.020238
GO:0010410 hemicellulose metabolic process 50.0% (1/2) 6.38 0.011988 0.020753
GO:0050793 regulation of developmental process 100.0% (2/2) 3.18 0.012229 0.020993
GO:0009725 response to hormone 100.0% (2/2) 3.16 0.0126 0.021102
GO:0048653 anther development 50.0% (1/2) 6.29 0.012751 0.021183
GO:1903338 regulation of cell wall organization or biogenesis 50.0% (1/2) 6.31 0.012548 0.021187
GO:0048523 negative regulation of cellular process 100.0% (2/2) 3.16 0.012542 0.021353
GO:0009719 response to endogenous stimulus 100.0% (2/2) 3.06 0.014412 0.023751
GO:0044089 positive regulation of cellular component biogenesis 50.0% (1/2) 6.07 0.014834 0.024253
GO:0010089 xylem development 50.0% (1/2) 6.04 0.015088 0.024474
GO:0031326 regulation of cellular biosynthetic process 100.0% (2/2) 3.01 0.015348 0.024701
GO:0046982 protein heterodimerization activity 50.0% (1/2) 5.96 0.015951 0.025473
GO:0010468 regulation of gene expression 100.0% (2/2) 2.96 0.016399 0.025592
GO:0009889 regulation of biosynthetic process 100.0% (2/2) 2.97 0.016366 0.025736
GO:0009735 response to cytokinin 50.0% (1/2) 5.93 0.016306 0.02584
GO:0010383 cell wall polysaccharide metabolic process 50.0% (1/2) 5.88 0.016915 0.0262
GO:0048583 regulation of response to stimulus 100.0% (2/2) 2.88 0.018347 0.028206
GO:0048522 positive regulation of cellular process 100.0% (2/2) 2.85 0.019139 0.029205
GO:0005634 nucleus 100.0% (2/2) 2.81 0.020296 0.030517
GO:0003006 developmental process involved in reproduction 100.0% (2/2) 2.81 0.020201 0.030598
GO:0009741 response to brassinosteroid 50.0% (1/2) 5.59 0.020666 0.030849
GO:0051171 regulation of nitrogen compound metabolic process 100.0% (2/2) 2.78 0.02118 0.031164
GO:0003676 nucleic acid binding 100.0% (2/2) 2.78 0.021157 0.031356
GO:0044036 cell wall macromolecule metabolic process 50.0% (1/2) 5.52 0.021628 0.031598
GO:0048519 negative regulation of biological process 100.0% (2/2) 2.7 0.023543 0.034154
GO:0080090 regulation of primary metabolic process 100.0% (2/2) 2.69 0.024112 0.034735
GO:0060255 regulation of macromolecule metabolic process 100.0% (2/2) 2.66 0.024978 0.035732
GO:1901700 response to oxygen-containing compound 100.0% (2/2) 2.61 0.026671 0.037632
GO:0031323 regulation of cellular metabolic process 100.0% (2/2) 2.62 0.026604 0.037797
GO:0048518 positive regulation of biological process 100.0% (2/2) 2.53 0.029835 0.041809
GO:0044264 cellular polysaccharide metabolic process 50.0% (1/2) 5.03 0.030364 0.042263
GO:0022414 reproductive process 100.0% (2/2) 2.51 0.030977 0.042827
GO:0032501 multicellular organismal process 100.0% (2/2) 2.47 0.032398 0.044493
GO:0010033 response to organic substance 100.0% (2/2) 2.46 0.033055 0.045095
GO:0010087 phloem or xylem histogenesis 50.0% (1/2) 4.83 0.034793 0.047153
GO:0009628 response to abiotic stimulus 100.0% (2/2) 2.38 0.036714 0.049432
GO:0019222 regulation of metabolic process 100.0% (2/2) 2.38 0.036999 0.049492
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

Family Terms