Coexpression cluster: Cluster_446 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0071490 cellular response to far red light 100.0% (2/2) 10.35 1e-06 3.1e-05
GO:0010018 far-red light signaling pathway 100.0% (2/2) 10.4 1e-06 5.8e-05
GO:0071491 cellular response to red light 100.0% (2/2) 8.85 5e-06 0.000102
GO:0071483 cellular response to blue light 100.0% (2/2) 8.67 6e-06 0.000108
GO:0010161 red light signaling pathway 100.0% (2/2) 8.86 5e-06 0.000124
GO:0009785 blue light signaling pathway 100.0% (2/2) 9.03 4e-06 0.000132
GO:0071489 cellular response to red or far red light 100.0% (2/2) 8.11 1.3e-05 0.000141
GO:0010017 red or far-red light signaling pathway 100.0% (2/2) 8.13 1.3e-05 0.000154
GO:0030522 intracellular receptor signaling pathway 100.0% (2/2) 8.13 1.3e-05 0.000154
GO:0010099 regulation of photomorphogenesis 100.0% (2/2) 8.22 1.1e-05 0.000174
GO:0010218 response to far red light 100.0% (2/2) 7.71 2.3e-05 0.000226
GO:0030674 protein-macromolecule adaptor activity 100.0% (2/2) 7.38 3.6e-05 0.000324
GO:2000030 regulation of response to red or far red light 100.0% (2/2) 7.24 4.3e-05 0.000364
GO:0060090 molecular adaptor activity 100.0% (2/2) 7.13 5.1e-05 0.000398
GO:0010114 response to red light 100.0% (2/2) 6.91 6.8e-05 0.000498
GO:0009637 response to blue light 100.0% (2/2) 6.82 7.8e-05 0.000529
GO:0010224 response to UV-B 100.0% (2/2) 6.76 8.5e-05 0.000545
GO:0071482 cellular response to light stimulus 100.0% (2/2) 6.38 0.000143 0.000866
GO:0009658 chloroplast organization 100.0% (2/2) 6.29 0.000163 0.000933
GO:0071478 cellular response to radiation 100.0% (2/2) 6.22 0.000181 0.000985
GO:0009657 plastid organization 100.0% (2/2) 6.11 0.00021 0.00109
GO:0007623 circadian rhythm 100.0% (2/2) 5.97 0.000255 0.001265
GO:0009909 regulation of flower development 100.0% (2/2) 5.82 0.000313 0.001312
GO:0009639 response to red or far red light 100.0% (2/2) 5.82 0.000311 0.001357
GO:0009411 response to UV 100.0% (2/2) 5.83 0.00031 0.001409
GO:0048831 regulation of shoot system development 100.0% (2/2) 5.73 0.000352 0.001422
GO:0048511 rhythmic process 100.0% (2/2) 5.83 0.000308 0.001462
GO:0010200 response to chitin 100.0% (2/2) 5.55 0.000455 0.00177
GO:0071214 cellular response to abiotic stimulus 100.0% (2/2) 5.25 0.000694 0.00252
GO:0104004 cellular response to environmental stimulus 100.0% (2/2) 5.25 0.000694 0.00252
GO:1902679 negative regulation of RNA biosynthetic process 100.0% (2/2) 4.93 0.001082 0.003573
GO:1903507 negative regulation of nucleic acid-templated transcription 100.0% (2/2) 4.93 0.001082 0.003573
GO:0045892 negative regulation of DNA-templated transcription 100.0% (2/2) 4.94 0.001065 0.003744
GO:0051253 negative regulation of RNA metabolic process 100.0% (2/2) 4.77 0.001341 0.0043
GO:0045934 negative regulation of nucleobase-containing compound metabolic process 100.0% (2/2) 4.64 0.001614 0.004888
GO:0010558 negative regulation of macromolecule biosynthetic process 100.0% (2/2) 4.64 0.001602 0.004989
GO:0009890 negative regulation of biosynthetic process 100.0% (2/2) 4.51 0.001917 0.005224
GO:0003700 DNA-binding transcription factor activity 100.0% (2/2) 4.49 0.001985 0.005277
GO:0048580 regulation of post-embryonic development 100.0% (2/2) 4.52 0.001899 0.005308
GO:2000241 regulation of reproductive process 100.0% (2/2) 4.46 0.002052 0.005325
GO:0010243 response to organonitrogen compound 100.0% (2/2) 4.53 0.00187 0.005365
GO:0031327 negative regulation of cellular biosynthetic process 100.0% (2/2) 4.55 0.001824 0.005374
GO:0001067 transcription regulatory region nucleic acid binding 100.0% (2/2) 4.33 0.00247 0.005982
GO:1901698 response to nitrogen compound 100.0% (2/2) 4.36 0.002382 0.006037
GO:0000976 transcription cis-regulatory region binding 100.0% (2/2) 4.34 0.002452 0.006074
GO:1990837 sequence-specific double-stranded DNA binding 100.0% (2/2) 4.3 0.002567 0.006083
GO:2000026 regulation of multicellular organismal development 100.0% (2/2) 4.18 0.003027 0.006733
GO:0140110 transcription regulator activity 100.0% (2/2) 4.21 0.002929 0.006793
GO:0003690 double-stranded DNA binding 100.0% (2/2) 4.19 0.003018 0.006855
GO:0051172 negative regulation of nitrogen compound metabolic process 100.0% (2/2) 4.05 0.003662 0.007677
GO:0043565 sequence-specific DNA binding 100.0% (2/2) 4.06 0.003616 0.007729
GO:0031324 negative regulation of cellular metabolic process 100.0% (2/2) 4.07 0.003549 0.007736
GO:0010605 negative regulation of macromolecule metabolic process 100.0% (2/2) 3.78 0.005292 0.010884
GO:0009416 response to light stimulus 100.0% (2/2) 3.75 0.00556 0.011222
GO:0009314 response to radiation 100.0% (2/2) 3.68 0.006099 0.011662
GO:0042802 identical protein binding 100.0% (2/2) 3.7 0.005928 0.011748
GO:0006996 organelle organization 100.0% (2/2) 3.68 0.006079 0.011832
GO:0009892 negative regulation of metabolic process 100.0% (2/2) 3.63 0.006492 0.011994
GO:0051239 regulation of multicellular organismal process 100.0% (2/2) 3.64 0.006451 0.012124
GO:0003677 DNA binding 100.0% (2/2) 3.57 0.00713 0.012953
GO:2001141 regulation of RNA biosynthetic process 100.0% (2/2) 3.47 0.008154 0.014107
GO:1903506 regulation of nucleic acid-templated transcription 100.0% (2/2) 3.47 0.008144 0.014318
GO:0006355 regulation of DNA-templated transcription 100.0% (2/2) 3.47 0.008098 0.014471
GO:0005737 cytoplasm 100.0% (2/2) 3.41 0.008818 0.015018
GO:0051252 regulation of RNA metabolic process 100.0% (2/2) 3.34 0.009805 0.016443
GO:0007165 signal transduction 100.0% (2/2) 3.26 0.010866 0.017945
GO:0046872 metal ion binding 100.0% (2/2) 3.21 0.011675 0.018444
GO:0010556 regulation of macromolecule biosynthetic process 100.0% (2/2) 3.23 0.011368 0.018494
GO:0019219 regulation of nucleobase-containing compound metabolic process 100.0% (2/2) 3.22 0.011593 0.018582
GO:0050793 regulation of developmental process 100.0% (2/2) 3.18 0.012229 0.018774
GO:0048523 negative regulation of cellular process 100.0% (2/2) 3.16 0.012542 0.018988
GO:0043169 cation binding 100.0% (2/2) 3.18 0.012223 0.019034
GO:0031326 regulation of cellular biosynthetic process 100.0% (2/2) 3.01 0.015348 0.022917
GO:0010468 regulation of gene expression 100.0% (2/2) 2.96 0.016399 0.023833
GO:0009889 regulation of biosynthetic process 100.0% (2/2) 2.97 0.016366 0.024107
GO:0048583 regulation of response to stimulus 100.0% (2/2) 2.88 0.018347 0.026314
GO:0005634 nucleus 100.0% (2/2) 2.81 0.020296 0.02873
GO:0051171 regulation of nitrogen compound metabolic process 100.0% (2/2) 2.78 0.02118 0.029223
GO:0051716 cellular response to stimulus 100.0% (2/2) 2.76 0.021689 0.029551
GO:0003676 nucleic acid binding 100.0% (2/2) 2.78 0.021157 0.029566
GO:0048519 negative regulation of biological process 100.0% (2/2) 2.7 0.023543 0.031682
GO:0080090 regulation of primary metabolic process 100.0% (2/2) 2.69 0.024112 0.032051
GO:0060255 regulation of macromolecule metabolic process 100.0% (2/2) 2.66 0.024978 0.032802
GO:0016043 cellular component organization 100.0% (2/2) 2.61 0.026671 0.033804
GO:1901700 response to oxygen-containing compound 100.0% (2/2) 2.61 0.026671 0.033804
GO:0031323 regulation of cellular metabolic process 100.0% (2/2) 2.62 0.026604 0.034522
GO:0071840 cellular component organization or biogenesis 100.0% (2/2) 2.52 0.030234 0.037879
GO:0010033 response to organic substance 100.0% (2/2) 2.46 0.033055 0.040483
GO:0043167 ion binding 100.0% (2/2) 2.46 0.032934 0.040793
GO:0019222 regulation of metabolic process 100.0% (2/2) 2.38 0.036999 0.044317
GO:0009628 response to abiotic stimulus 100.0% (2/2) 2.38 0.036714 0.044465
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

Family Terms