Coexpression cluster: Cluster_471 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043023 ribosomal large subunit binding 50.0% (1/2) 9.73 0.001177 0.036341
GO:0035196 miRNA processing 50.0% (1/2) 7.81 0.004447 0.037459
GO:0001822 kidney development 50.0% (1/2) 7.85 0.004344 0.037743
GO:0033120 positive regulation of RNA splicing 50.0% (1/2) 7.85 0.004344 0.037743
GO:0009266 response to temperature stimulus 100.0% (2/2) 3.96 0.004145 0.03841
GO:0009891 positive regulation of biosynthetic process 100.0% (2/2) 3.97 0.00405 0.038824
GO:0031328 positive regulation of cellular biosynthetic process 100.0% (2/2) 4.0 0.003911 0.038832
GO:0022008 neurogenesis 50.0% (1/2) 8.21 0.003374 0.039084
GO:0048255 mRNA stabilization 50.0% (1/2) 8.21 0.003374 0.039084
GO:0048793 pronephros development 50.0% (1/2) 9.8 0.001125 0.039106
GO:0043489 RNA stabilization 50.0% (1/2) 7.68 0.004855 0.039697
GO:0048869 cellular developmental process 100.0% (2/2) 3.74 0.005575 0.03974
GO:0070181 small ribosomal subunit rRNA binding 50.0% (1/2) 9.45 0.001432 0.039814
GO:0050685 positive regulation of mRNA processing 50.0% (1/2) 8.06 0.003732 0.039901
GO:0080134 regulation of response to stress 100.0% (2/2) 3.65 0.006316 0.039908
GO:1902373 negative regulation of mRNA catabolic process 50.0% (1/2) 8.01 0.003885 0.04
GO:1902369 negative regulation of RNA catabolic process 50.0% (1/2) 7.54 0.005365 0.040313
GO:1903312 negative regulation of mRNA metabolic process 50.0% (1/2) 7.54 0.005365 0.040313
GO:0030371 translation repressor activity 50.0% (1/2) 8.1 0.00363 0.040361
GO:0003730 mRNA 3'-UTR binding 50.0% (1/2) 7.31 0.006284 0.040625
GO:0010582 floral meristem determinacy 50.0% (1/2) 7.31 0.006284 0.040625
GO:0009631 cold acclimation 50.0% (1/2) 7.06 0.007456 0.040645
GO:0009416 response to light stimulus 100.0% (2/2) 3.75 0.00556 0.040674
GO:0022611 dormancy process 50.0% (1/2) 7.07 0.007405 0.041175
GO:0009314 response to radiation 100.0% (2/2) 3.68 0.006099 0.041352
GO:0010048 vernalization response 50.0% (1/2) 9.25 0.001637 0.041363
GO:0030154 cell differentiation 100.0% (2/2) 4.4 0.002251 0.041719
GO:0010022 meristem determinacy 50.0% (1/2) 7.08 0.007355 0.041726
GO:0048026 positive regulation of mRNA splicing, via spliceosome 50.0% (1/2) 8.23 0.003323 0.041992
GO:0009910 negative regulation of flower development 50.0% (1/2) 7.1 0.007253 0.042004
GO:0051173 positive regulation of nitrogen compound metabolic process 100.0% (2/2) 3.68 0.006051 0.042053
GO:0010494 cytoplasmic stress granule 50.0% (1/2) 6.91 0.008323 0.042068
GO:0015935 small ribosomal subunit 50.0% (1/2) 6.91 0.008323 0.042068
GO:0003677 DNA binding 100.0% (2/2) 3.57 0.00713 0.042173
GO:0043022 ribosome binding 50.0% (1/2) 7.55 0.005314 0.042211
GO:0016553 base conversion or substitution editing 50.0% (1/2) 6.87 0.008527 0.042329
GO:0031325 positive regulation of cellular metabolic process 100.0% (2/2) 3.59 0.006856 0.042355
GO:0010604 positive regulation of macromolecule metabolic process 100.0% (2/2) 3.58 0.007009 0.042361
GO:0060212 negative regulation of nuclear-transcribed mRNA poly(A) tail shortening 50.0% (1/2) 9.86 0.001074 0.042662
GO:1900152 negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 50.0% (1/2) 9.86 0.001074 0.042662
GO:0070918 small regulatory ncRNA processing 50.0% (1/2) 6.93 0.00817 0.042854
GO:0016554 cytidine to uridine editing 50.0% (1/2) 6.95 0.008068 0.043133
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 100.0% (2/2) 4.13 0.003259 0.043146
GO:0007369 gastrulation 50.0% (1/2) 8.32 0.003119 0.043351
GO:0031330 negative regulation of cellular catabolic process 50.0% (1/2) 6.31 0.012548 0.044155
GO:0043484 regulation of RNA splicing 50.0% (1/2) 6.31 0.012548 0.044155
GO:0009409 response to cold 100.0% (2/2) 4.51 0.001928 0.044676
GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 50.0% (1/2) 8.8 0.00225 0.04468
GO:0010557 positive regulation of macromolecule biosynthetic process 100.0% (2/2) 4.18 0.003058 0.044743
GO:0050684 regulation of mRNA processing 50.0% (1/2) 6.38 0.011937 0.044846
GO:0061013 regulation of mRNA catabolic process 50.0% (1/2) 6.38 0.011937 0.044846
GO:0019843 rRNA binding 50.0% (1/2) 6.32 0.012446 0.044934
GO:0005507 copper ion binding 50.0% (1/2) 6.27 0.012954 0.045016
GO:0015934 large ribosomal subunit 50.0% (1/2) 6.34 0.012344 0.045154
GO:0098798 mitochondrial protein-containing complex 50.0% (1/2) 6.34 0.012344 0.045154
GO:0034250 positive regulation of cellular amide metabolic process 50.0% (1/2) 6.24 0.013158 0.045158
GO:0048870 cell motility 50.0% (1/2) 6.22 0.013361 0.045297
GO:0009893 positive regulation of metabolic process 100.0% (2/2) 3.37 0.00929 0.045311
GO:0019219 regulation of nucleobase-containing compound metabolic process 100.0% (2/2) 3.22 0.011593 0.045391
GO:0043021 ribonucleoprotein complex binding 50.0% (1/2) 6.4 0.011785 0.045502
GO:0048024 regulation of mRNA splicing, via spliceosome 50.0% (1/2) 6.72 0.009494 0.045508
GO:0034063 stress granule assembly 50.0% (1/2) 8.47 0.002812 0.045988
GO:0045727 positive regulation of translation 50.0% (1/2) 6.43 0.011581 0.045994
GO:0051252 regulation of RNA metabolic process 100.0% (2/2) 3.34 0.009805 0.046201
GO:0043487 regulation of RNA stability 50.0% (1/2) 6.43 0.01153 0.046456
GO:0003690 double-stranded DNA binding 100.0% (2/2) 4.19 0.003018 0.046619
GO:0030425 dendrite 50.0% (1/2) 6.58 0.010411 0.046681
GO:0043488 regulation of mRNA stability 50.0% (1/2) 6.58 0.010411 0.046681
GO:1901002 positive regulation of response to salt stress 50.0% (1/2) 6.58 0.010411 0.046681
GO:0080156 mitochondrial mRNA modification 50.0% (1/2) 6.55 0.010614 0.046838
GO:0070417 cellular response to cold 50.0% (1/2) 6.44 0.011479 0.046931
GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening 50.0% (1/2) 8.83 0.002199 0.047024
GO:0010556 regulation of macromolecule biosynthetic process 100.0% (2/2) 3.23 0.011368 0.047168
GO:1900864 mitochondrial RNA modification 50.0% (1/2) 6.1 0.014479 0.047354
GO:0003697 single-stranded DNA binding 50.0% (1/2) 6.49 0.011072 0.047356
GO:0045182 translation regulator activity 50.0% (1/2) 6.12 0.014326 0.047413
GO:0016477 cell migration 50.0% (1/2) 6.47 0.011276 0.047496
GO:0016556 mRNA modification 50.0% (1/2) 6.13 0.014225 0.047644
GO:1903313 positive regulation of mRNA metabolic process 50.0% (1/2) 6.51 0.010971 0.047654
GO:0051254 positive regulation of RNA metabolic process 100.0% (2/2) 4.24 0.002784 0.048377
GO:0048573 photoperiodism, flowering 50.0% (1/2) 6.02 0.015393 0.049186
GO:0031326 regulation of cellular biosynthetic process 100.0% (2/2) 3.01 0.015348 0.049615
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

Family Terms