Coexpression cluster: Cluster_282 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0048257 3'-flap endonuclease activity 25.0% (1/4) 13.25 0.000102 0.001569
GO:0048476 Holliday junction resolvase complex 25.0% (1/4) 13.25 0.000102 0.001569
GO:1905347 endodeoxyribonuclease complex 25.0% (1/4) 13.25 0.000102 0.001569
GO:0000939 inner kinetochore 25.0% (1/4) 13.25 0.000102 0.001569
GO:0008853 exodeoxyribonuclease III activity 25.0% (1/4) 13.25 0.000102 0.001569
GO:0021762 substantia nigra development 25.0% (1/4) 13.25 0.000102 0.001569
GO:0030896 checkpoint clamp complex 25.0% (1/4) 13.25 0.000102 0.001569
GO:0000075 cell cycle checkpoint signaling 50.0% (2/4) 6.77 0.000124 0.00176
GO:1901988 negative regulation of cell cycle phase transition 50.0% (2/4) 6.47 0.000188 0.002468
GO:0031570 DNA integrity checkpoint signaling 50.0% (2/4) 7.34 5.7e-05 0.002612
GO:0022402 cell cycle process 75.0% (3/4) 4.29 0.000217 0.002667
GO:0042770 signal transduction in response to DNA damage 50.0% (2/4) 7.47 4.7e-05 0.002877
GO:0006259 DNA metabolic process 75.0% (3/4) 4.75 8.5e-05 0.003126
GO:0010948 negative regulation of cell cycle process 50.0% (2/4) 6.09 0.000319 0.003455
GO:0000077 DNA damage checkpoint signaling 50.0% (2/4) 7.63 3.8e-05 0.003494
GO:0048857 neural nucleus development 25.0% (1/4) 11.67 0.000307 0.00353
GO:0045786 negative regulation of cell cycle 50.0% (2/4) 5.88 0.000429 0.004157
GO:0051598 meiotic recombination checkpoint signaling 25.0% (1/4) 11.25 0.000409 0.004184
GO:0004536 deoxyribonuclease activity 50.0% (2/4) 7.99 2.3e-05 0.004218
GO:0140097 catalytic activity, acting on DNA 50.0% (2/4) 5.77 0.000496 0.004562
GO:0005664 nuclear origin of replication recognition complex 25.0% (1/4) 10.67 0.000614 0.005134
GO:0004518 nuclease activity 50.0% (2/4) 5.63 0.000606 0.00531
GO:1901987 regulation of cell cycle phase transition 50.0% (2/4) 5.49 0.00073 0.005844
GO:0000808 origin recognition complex 25.0% (1/4) 10.25 0.000818 0.006275
GO:0000727 double-strand break repair via break-induced replication 25.0% (1/4) 10.08 0.000921 0.006776
GO:0051276 chromosome organization 50.0% (2/4) 5.28 0.000979 0.006926
GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters 25.0% (1/4) 9.8 0.001125 0.007394
GO:0033313 meiotic cell cycle checkpoint signaling 25.0% (1/4) 9.8 0.001125 0.007394
GO:0005694 chromosome 50.0% (2/4) 5.1 0.00124 0.007871
GO:0031573 mitotic intra-S DNA damage checkpoint signaling 25.0% (1/4) 9.55 0.00133 0.008156
GO:0006281 DNA repair 50.0% (2/4) 4.9 0.00165 0.008674
GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters 25.0% (1/4) 9.25 0.001636 0.008856
GO:0045835 negative regulation of meiotic nuclear division 25.0% (1/4) 9.25 0.001636 0.008856
GO:1903046 meiotic cell cycle process 50.0% (2/4) 4.93 0.001581 0.009091
GO:0048256 flap endonuclease activity 25.0% (1/4) 9.35 0.001534 0.009106
GO:0000712 resolution of meiotic recombination intermediates 25.0% (1/4) 8.86 0.002147 0.009878
GO:0003688 DNA replication origin binding 25.0% (1/4) 8.86 0.002147 0.009878
GO:0006270 DNA replication initiation 25.0% (1/4) 8.8 0.00225 0.010095
GO:0010564 regulation of cell cycle process 50.0% (2/4) 4.71 0.002128 0.010302
GO:1903047 mitotic cell cycle process 50.0% (2/4) 4.74 0.002033 0.01039
GO:0090304 nucleic acid metabolic process 75.0% (3/4) 3.18 0.002104 0.010463
GO:0044260 cellular macromolecule metabolic process 75.0% (3/4) 3.1 0.002517 0.011025
GO:0007129 homologous chromosome pairing at meiosis 25.0% (1/4) 8.45 0.002862 0.01197
GO:0051447 negative regulation of meiotic cell cycle 25.0% (1/4) 8.45 0.002862 0.01197
GO:1905348 endonuclease complex 25.0% (1/4) 8.35 0.003067 0.012539
GO:0006974 cellular response to DNA damage stimulus 50.0% (2/4) 4.4 0.003266 0.013063
GO:0006139 nucleobase-containing compound metabolic process 75.0% (3/4) 2.89 0.003804 0.014583
GO:0140640 catalytic activity, acting on a nucleic acid 50.0% (2/4) 4.27 0.003896 0.01463
GO:0006312 mitotic recombination 25.0% (1/4) 8.04 0.003781 0.014803
GO:0004520 endodeoxyribonuclease activity 25.0% (1/4) 7.93 0.004087 0.015041
GO:0004529 exodeoxyribonuclease activity 25.0% (1/4) 7.83 0.004393 0.015545
GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters 25.0% (1/4) 7.83 0.004393 0.015545
GO:0051726 regulation of cell cycle 50.0% (2/4) 4.15 0.004572 0.015871
GO:0048523 negative regulation of cellular process 75.0% (3/4) 2.74 0.005145 0.017532
GO:0035556 intracellular signal transduction 50.0% (2/4) 3.98 0.0058 0.019404
GO:0051784 negative regulation of nuclear division 25.0% (1/4) 7.37 0.006024 0.019794
GO:0030261 chromosome condensation 25.0% (1/4) 7.25 0.006534 0.021091
GO:0032991 protein-containing complex 75.0% (3/4) 2.6 0.006852 0.02137
GO:0040020 regulation of meiotic nuclear division 25.0% (1/4) 7.21 0.006737 0.021373
GO:0071479 cellular response to ionizing radiation 25.0% (1/4) 7.15 0.007043 0.021597
GO:0000794 condensed nuclear chromosome 25.0% (1/4) 7.1 0.007246 0.021857
GO:0008408 3'-5' exonuclease activity 25.0% (1/4) 7.04 0.007551 0.022055
GO:0044773 mitotic DNA damage checkpoint signaling 25.0% (1/4) 7.06 0.00745 0.022109
GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 25.0% (1/4) 6.91 0.008264 0.023038
GO:0140513 nuclear protein-containing complex 50.0% (2/4) 3.72 0.008244 0.023338
GO:0046483 heterocycle metabolic process 75.0% (3/4) 2.51 0.008227 0.023652
GO:0044774 mitotic DNA integrity checkpoint signaling 25.0% (1/4) 6.85 0.00867 0.023811
GO:0016788 hydrolase activity, acting on ester bonds 50.0% (2/4) 3.66 0.008882 0.024034
GO:0034641 cellular nitrogen compound metabolic process 75.0% (3/4) 2.46 0.009101 0.024268
GO:0003684 damaged DNA binding 25.0% (1/4) 6.65 0.00989 0.025996
GO:0070192 chromosome organization involved in meiotic cell cycle 25.0% (1/4) 6.49 0.011108 0.028787
GO:0005654 nucleoplasm 50.0% (2/4) 3.45 0.011758 0.028846
GO:0000793 condensed chromosome 25.0% (1/4) 6.41 0.011717 0.029134
GO:0000792 heterochromatin 25.0% (1/4) 6.41 0.011717 0.029134
GO:0061982 meiosis I cell cycle process 25.0% (1/4) 6.45 0.011413 0.029166
GO:0006725 cellular aromatic compound metabolic process 75.0% (3/4) 2.31 0.012176 0.029479
GO:0004527 exonuclease activity 25.0% (1/4) 6.31 0.012528 0.029937
GO:0048519 negative regulation of biological process 75.0% (3/4) 2.29 0.012785 0.030159
GO:0000781 chromosome, telomeric region 25.0% (1/4) 6.25 0.013035 0.03036
GO:0051445 regulation of meiotic cell cycle 25.0% (1/4) 6.2 0.013542 0.031146
GO:0000723 telomere maintenance 25.0% (1/4) 6.16 0.013947 0.031295
GO:0032200 telomere organization 25.0% (1/4) 6.16 0.013947 0.031295
GO:0000228 nuclear chromosome 25.0% (1/4) 6.08 0.014655 0.031724
GO:0000724 double-strand break repair via homologous recombination 25.0% (1/4) 6.08 0.014655 0.031724
GO:0007093 mitotic cell cycle checkpoint signaling 25.0% (1/4) 6.08 0.014655 0.031724
GO:0000725 recombinational repair 25.0% (1/4) 6.06 0.014858 0.031789
GO:1901360 organic cyclic compound metabolic process 75.0% (3/4) 2.18 0.015778 0.033369
GO:0010212 response to ionizing radiation 25.0% (1/4) 5.93 0.016274 0.034027
GO:0045930 negative regulation of mitotic cell cycle 25.0% (1/4) 5.6 0.020512 0.041936
GO:0051783 regulation of nuclear division 25.0% (1/4) 5.6 0.020512 0.041936
GO:0006302 double-strand break repair 25.0% (1/4) 5.35 0.024235 0.049003
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (4) (download table)

InterPro Domains

GO Terms

Family Terms