SOLTUB.AGRIA.G00000011142

Description : Auxin-responsive family protein

Gene families : OG_02_0005713 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000011142
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_142

Target	Alias	Description	ECC score	Gene Family Method
SOLTUB.AGRIA.G00000011319	No alias	Auxin-responsive family protein	0.03	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000011319	No alias	Auxin-responsive family protein	0.03	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000011319	No alias	Auxin-responsive family protein	0.03	Orthogroups with 8 Potato genotypes

Type	GO Term	Name	Evidence	Source
BP	GO:0003002	regionalization	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005737	cytoplasm	IEA	AHRD
BP	GO:0006810	transport	None	Extended
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009606	tropism	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009629	response to gravity	None	Extended
BP	GO:0009630	gravitropism	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEA	AHRD
BP	GO:0009914	hormone transport	None	Extended
BP	GO:0009956	radial pattern formation	None	Extended
BP	GO:0009958	positive gravitropism	IEA	AHRD
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010817	regulation of hormone levels	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0060918	auxin transport	IEA	AHRD
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0090057	root radial pattern formation	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1900140	regulation of seedling development	IEA	AHRD
BP	GO:2000026	regulation of multicellular organismal development	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002215	defense response to nematode	IEP	Predict GO terms from Neighborhoods
MF	GO:0003993	acid phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004601	peroxidase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005576	extracellular region	IEP	Predict GO terms from Neighborhoods
BP	GO:0006979	response to oxidative stress	IEP	Predict GO terms from Neighborhoods
MF	GO:0008198	ferrous iron binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008199	ferric iron binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0009986	cell surface	IEP	Predict GO terms from Neighborhoods
BP	GO:0010043	response to zinc ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010089	xylem development	IEP	Predict GO terms from Neighborhoods
MF	GO:0016209	antioxidant activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Predict GO terms from Neighborhoods
BP	GO:0030002	cellular anion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030643	cellular phosphate ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0036294	cellular response to decreased oxygen levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0042743	hydrogen peroxide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042744	hydrogen peroxide catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0043169	cation binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0046872	metal ion binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0046914	transition metal ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0055062	phosphate ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055081	anion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0071456	cellular response to hypoxia	IEP	Predict GO terms from Neighborhoods
BP	GO:0072502	cellular trivalent inorganic anion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0072506	trivalent inorganic anion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0098869	cellular oxidant detoxification	IEP	Predict GO terms from Neighborhoods
BP	GO:1900055	regulation of leaf senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:1900057	positive regulation of leaf senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:1900378	positive regulation of secondary metabolite biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901141	regulation of lignin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901428	regulation of syringal lignin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901430	positive regulation of syringal lignin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1990748	cellular detoxification	IEP	Predict GO terms from Neighborhoods
BP	GO:2000762	regulation of phenylpropanoid metabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003676	SAUR_fam	34	96

External Links

No external refs found!

SOLTUB.AGRIA.G00000011142

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation