Description : Plasma membrane isoform 1
Gene families : OG_02_0011718 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000011194 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_247 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| SOLTUB.AGRIA.G00000011090 | No alias | Plasma membrane isoform 1 | 0.14 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000011090 | No alias | Plasma membrane isoform 1 | 0.14 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000011090 | No alias | Plasma membrane isoform 1 | 0.14 | Orthogroups with 8 Potato genotypes |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005543 | phospholipid binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005768 | endosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006886 | intracellular protein transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007034 | vacuolar transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007041 | lysosomal transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008104 | protein localization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008289 | lipid binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008333 | endosome to lysosome transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009968 | negative regulation of signal transduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010648 | negative regulation of cell communication | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0012506 | vesicle membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015031 | protein transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016197 | endosomal transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0023057 | negative regulation of signaling | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030141 | secretory granule | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030659 | cytoplasmic vesicle membrane | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032182 | ubiquitin-like protein binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032509 | endosome transport via multivesicular body sorting pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032511 | late endosome to vacuole transport via multivesicular body sorting pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033365 | protein localization to organelle | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043130 | ubiquitin binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043328 | protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045184 | establishment of protein localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045324 | late endosome to vacuole transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046907 | intracellular transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051649 | establishment of localization in cell | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071985 | multivesicular body sorting pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072665 | protein localization to vacuole | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072666 | establishment of protein localization to vacuole | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0099503 | secretory vesicle | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140030 | modification-dependent protein binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140035 | ubiquitination-like modification-dependent protein binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140036 | ubiquitin-dependent protein binding | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |