SOLTUB.AGRIA.G00000011508

Description : F-box protein family

Gene families : OG_02_0008407 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000011508
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_266

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	AHRD
CC	GO:0005929	cilium	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
CC	GO:0030424	axon	IEA	AHRD
CC	GO:0030425	dendrite	IEA	AHRD
BP	GO:0032879	regulation of localization	None	Extended
CC	GO:0042995	cell projection	None	Extended
CC	GO:0043005	neuron projection	None	Extended
CC	GO:0043204	perikaryon	IEA	AHRD
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
BP	GO:0044057	regulation of system process	None	Extended
BP	GO:0044058	regulation of digestive system process	None	Extended
BP	GO:0044062	regulation of excretion	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0051046	regulation of secretion	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0061062	regulation of nematode larval development	None	Extended
BP	GO:0061065	regulation of dauer larval development	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0120025	plasma membrane bounded cell projection	None	Extended
BP	GO:1905909	regulation of dauer entry	IEA	AHRD
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000292	regulation of defecation	None	Extended
BP	GO:2000746	regulation of defecation rhythm	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
MF	GO:0004852	uroporphyrinogen-III synthase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005777	peroxisome	IEP	Predict GO terms from Neighborhoods
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006780	uroporphyrinogen III biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006782	protoporphyrinogen IX biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0015994	chlorophyll metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0015995	chlorophyll biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016829	lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016836	hydro-lyase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042440	pigment metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0042579	microbody	IEP	Predict GO terms from Neighborhoods
BP	GO:0046148	pigment biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046501	protoporphyrinogen IX metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046502	uroporphyrinogen III metabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001810	F-box_dom	118	161
IPR036047	F-box-like_dom_sf	117	206

External Links

No external refs found!

SOLTUB.AGRIA.G00000011508

Expression Profile

Co-expression Networks

Functional Annotation