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  5. SOLTUB.AGRIA.G00000011509

SOLTUB.AGRIA.G00000011509


Description : Reticulon-like protein


Gene families : OG_02_0003342 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000011509
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_63


Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005739 mitochondrion IEA AHRD
CC GO:0005773 vacuole IEA AHRD
CC GO:0005788 endoplasmic reticulum lumen IEA AHRD
CC GO:0005794 Golgi apparatus IEA AHRD
CC GO:0009504 cell plate IEA AHRD
CC GO:0009510 plasmodesmatal desmotubule IEA AHRD
BP GO:0009617 response to bacterium IEA AHRD
BP GO:0048522 positive regulation of cellular process IEA AHRD
CC GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane IEA AHRD
CC GO:0071782 endoplasmic reticulum tubular network IEA AHRD
BP GO:0071786 endoplasmic reticulum tubular network organization IEA AHRD
BP GO:0080167 response to karrikin IEA AHRD
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predict GO terms from Neighborhoods
CC GO:0000109 nucleotide-excision repair complex IEP Predict GO terms from Neighborhoods
BP GO:0000282 cellular bud site selection IEP Predict GO terms from Neighborhoods
CC GO:0000322 storage vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000324 fungal-type vacuole IEP Predict GO terms from Neighborhoods
BP GO:0000380 alternative mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0000387 spliceosomal snRNP assembly IEP Predict GO terms from Neighborhoods
CC GO:0000922 spindle pole IEP Predict GO terms from Neighborhoods
BP GO:0001541 ovarian follicle development IEP Predict GO terms from Neighborhoods
BP GO:0001666 response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0001894 tissue homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0001932 regulation of protein phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0001934 positive regulation of protein phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0003006 developmental process involved in reproduction IEP Predict GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0004105 choline-phosphate cytidylyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004306 ethanolamine-phosphate cytidylyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004714 transmembrane receptor protein tyrosine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004715 non-membrane spanning protein tyrosine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005096 GTPase activator activity IEP Predict GO terms from Neighborhoods
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005793 endoplasmic reticulum-Golgi intermediate compartment IEP Predict GO terms from Neighborhoods
CC GO:0005814 centriole IEP Predict GO terms from Neighborhoods
CC GO:0005829 cytosol IEP Predict GO terms from Neighborhoods
CC GO:0005858 axonemal dynein complex IEP Predict GO terms from Neighborhoods
BP GO:0006289 nucleotide-excision repair IEP Predict GO terms from Neighborhoods
BP GO:0006417 regulation of translation IEP Predict GO terms from Neighborhoods
BP GO:0006446 regulation of translational initiation IEP Predict GO terms from Neighborhoods
BP GO:0006487 protein N-linked glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006646 phosphatidylethanolamine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006656 phosphatidylcholine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006657 CDP-choline pathway IEP Predict GO terms from Neighborhoods
BP GO:0006810 transport IEP Predict GO terms from Neighborhoods
BP GO:0006811 ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006812 cation transport IEP Predict GO terms from Neighborhoods
BP GO:0006828 manganese ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006873 cellular ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0006875 cellular metal ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0006901 vesicle coating IEP Predict GO terms from Neighborhoods
BP GO:0007099 centriole replication IEP Predict GO terms from Neighborhoods
BP GO:0007114 cell budding IEP Predict GO terms from Neighborhoods
BP GO:0007120 axial cellular bud site selection IEP Predict GO terms from Neighborhoods
BP GO:0007276 gamete generation IEP Predict GO terms from Neighborhoods
BP GO:0007283 spermatogenesis IEP Predict GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Predict GO terms from Neighborhoods
BP GO:0009306 protein secretion IEP Predict GO terms from Neighborhoods
BP GO:0009615 response to virus IEP Predict GO terms from Neighborhoods
BP GO:0009719 response to endogenous stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009725 response to hormone IEP Predict GO terms from Neighborhoods
BP GO:0009737 response to abscisic acid IEP Predict GO terms from Neighborhoods
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009966 regulation of signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0010033 response to organic substance IEP Predict GO terms from Neighborhoods
BP GO:0010068 protoderm histogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010288 response to lead ion IEP Predict GO terms from Neighborhoods
BP GO:0010469 regulation of signaling receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0010562 positive regulation of phosphorus metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010564 regulation of cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:0010646 regulation of cell communication IEP Predict GO terms from Neighborhoods
BP GO:0010669 epithelial structure maintenance IEP Predict GO terms from Neighborhoods
CC GO:0014069 postsynaptic density IEP Predict GO terms from Neighborhoods
BP GO:0015692 lead ion transport IEP Predict GO terms from Neighborhoods
CC GO:0016281 eukaryotic translation initiation factor 4F complex IEP Predict GO terms from Neighborhoods
BP GO:0017015 regulation of transforming growth factor beta receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0018108 peptidyl-tyrosine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0018212 peptidyl-tyrosine modification IEP Predict GO terms from Neighborhoods
BP GO:0019220 regulation of phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019954 asexual reproduction IEP Predict GO terms from Neighborhoods
BP GO:0022413 reproductive process in single-celled organism IEP Predict GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Predict GO terms from Neighborhoods
BP GO:0022600 digestive system process IEP Predict GO terms from Neighborhoods
BP GO:0023051 regulation of signaling IEP Predict GO terms from Neighborhoods
BP GO:0030001 metal ion transport IEP Predict GO terms from Neighborhoods
BP GO:0030003 cellular cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0030004 cellular monovalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0030007 cellular potassium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0030010 establishment of cell polarity IEP Predict GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Predict GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Predict GO terms from Neighborhoods
CC GO:0030126 COPI vesicle coat IEP Predict GO terms from Neighborhoods
CC GO:0030134 COPII-coated ER to Golgi transport vesicle IEP Predict GO terms from Neighborhoods
BP GO:0030277 maintenance of gastrointestinal epithelium IEP Predict GO terms from Neighborhoods
CC GO:0030286 dynein complex IEP Predict GO terms from Neighborhoods
BP GO:0030435 sporulation resulting in formation of a cellular spore IEP Predict GO terms from Neighborhoods
BP GO:0030437 ascospore formation IEP Predict GO terms from Neighborhoods
BP GO:0030512 negative regulation of transforming growth factor beta receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0030641 regulation of cellular pH IEP Predict GO terms from Neighborhoods
BP GO:0031023 microtubule organizing center organization IEP Predict GO terms from Neighborhoods
CC GO:0031074 nucleocytoplasmic transport complex IEP Predict GO terms from Neighborhoods
MF GO:0031210 phosphatidylcholine binding IEP Predict GO terms from Neighborhoods
CC GO:0031306 intrinsic component of mitochondrial outer membrane IEP Predict GO terms from Neighborhoods
CC GO:0031307 integral component of mitochondrial outer membrane IEP Predict GO terms from Neighborhoods
BP GO:0031401 positive regulation of protein modification process IEP Predict GO terms from Neighborhoods
CC GO:0031514 motile cilium IEP Predict GO terms from Neighborhoods
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predict GO terms from Neighborhoods
CC GO:0032391 photoreceptor connecting cilium IEP Predict GO terms from Neighborhoods
BP GO:0032468 Golgi calcium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0032472 Golgi calcium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0032505 reproduction of a single-celled organism IEP Predict GO terms from Neighborhoods
CC GO:0032588 trans-Golgi network membrane IEP Predict GO terms from Neighborhoods
CC GO:0032592 integral component of mitochondrial membrane IEP Predict GO terms from Neighborhoods
MF GO:0032795 heterotrimeric G-protein binding IEP Predict GO terms from Neighborhoods
CC GO:0032797 SMN complex IEP Predict GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:0033993 response to lipid IEP Predict GO terms from Neighborhoods
BP GO:0034248 regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035592 establishment of protein localization to extracellular region IEP Predict GO terms from Neighborhoods
CC GO:0035618 root hair IEP Predict GO terms from Neighborhoods
BP GO:0035751 regulation of lysosomal lumen pH IEP Predict GO terms from Neighborhoods
CC GO:0035869 ciliary transition zone IEP Predict GO terms from Neighborhoods
CC GO:0036064 ciliary basal body IEP Predict GO terms from Neighborhoods
CC GO:0036156 inner dynein arm IEP Predict GO terms from Neighborhoods
BP GO:0036293 response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
MF GO:0038024 cargo receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0040020 regulation of meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0042221 response to chemical IEP Predict GO terms from Neighborhoods
BP GO:0042325 regulation of phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0042327 positive regulation of phosphorylation IEP Predict GO terms from Neighborhoods
CC GO:0042564 NLS-dependent protein nuclear import complex IEP Predict GO terms from Neighborhoods
CC GO:0042587 glycogen granule IEP Predict GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Predict GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043935 sexual sporulation resulting in formation of a cellular spore IEP Predict GO terms from Neighborhoods
CC GO:0044615 nuclear pore nuclear basket IEP Predict GO terms from Neighborhoods
CC GO:0045177 apical part of cell IEP Predict GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0045504 dynein heavy chain binding IEP Predict GO terms from Neighborhoods
BP GO:0045727 positive regulation of translation IEP Predict GO terms from Neighborhoods
BP GO:0045787 positive regulation of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0045836 positive regulation of meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0045937 positive regulation of phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046337 phosphatidylethanolamine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046470 phosphatidylcholine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046786 viral replication complex formation and maintenance IEP Predict GO terms from Neighborhoods
BP GO:0046937 phytochelatin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046938 phytochelatin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0048193 Golgi vesicle transport IEP Predict GO terms from Neighborhoods
BP GO:0048200 Golgi transport vesicle coating IEP Predict GO terms from Neighborhoods
BP GO:0048205 COPI coating of Golgi vesicle IEP Predict GO terms from Neighborhoods
BP GO:0048232 male gamete generation IEP Predict GO terms from Neighborhoods
BP GO:0048609 multicellular organismal reproductive process IEP Predict GO terms from Neighborhoods
BP GO:0048768 root hair cell tip growth IEP Predict GO terms from Neighborhoods
MF GO:0050997 quaternary ammonium group binding IEP Predict GO terms from Neighborhoods
BP GO:0051098 regulation of binding IEP Predict GO terms from Neighborhoods
BP GO:0051130 positive regulation of cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0051174 regulation of phosphorus metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051179 localization IEP Predict GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Predict GO terms from Neighborhoods
BP GO:0051446 positive regulation of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051453 regulation of intracellular pH IEP Predict GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0051726 regulation of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051785 positive regulation of nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0055065 metal ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055067 monovalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055082 cellular chemical homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0060631 regulation of meiosis I IEP Predict GO terms from Neighborhoods
BP GO:0060903 positive regulation of meiosis I IEP Predict GO terms from Neighborhoods
BP GO:0065009 regulation of molecular function IEP Predict GO terms from Neighborhoods
CC GO:0070390 transcription export complex 2 IEP Predict GO terms from Neighborhoods
BP GO:0070482 response to oxygen levels IEP Predict GO terms from Neighborhoods
MF GO:0070567 cytidylyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0070990 snRNP binding IEP Predict GO terms from Neighborhoods
BP GO:0071284 cellular response to lead ion IEP Predict GO terms from Neighborhoods
BP GO:0071323 cellular response to chitin IEP Predict GO terms from Neighborhoods
BP GO:0071421 manganese ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0071692 protein localization to extracellular region IEP Predict GO terms from Neighborhoods
CC GO:0071942 XPC complex IEP Predict GO terms from Neighborhoods
MF GO:0080030 methyl indole-3-acetate esterase activity IEP Predict GO terms from Neighborhoods
BP GO:0090068 positive regulation of cell cycle process IEP Predict GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Predict GO terms from Neighborhoods
BP GO:0090092 regulation of transmembrane receptor protein serine/threonine kinase signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0090101 negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0090287 regulation of cellular response to growth factor stimulus IEP Predict GO terms from Neighborhoods
CC GO:0097729 9+2 motile cilium IEP Predict GO terms from Neighborhoods
BP GO:0098534 centriole assembly IEP Predict GO terms from Neighborhoods
CC GO:0098573 intrinsic component of mitochondrial membrane IEP Predict GO terms from Neighborhoods
BP GO:0098655 cation transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0098659 inorganic cation import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0098660 inorganic ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0098662 inorganic cation transmembrane transport IEP Predict GO terms from Neighborhoods
CC GO:0099572 postsynaptic specialization IEP Predict GO terms from Neighborhoods
BP GO:0099587 inorganic ion import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0099601 regulation of neurotransmitter receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0106310 protein serine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0120227 acyl-CoA binding IEP Predict GO terms from Neighborhoods
BP GO:1901419 regulation of response to alcohol IEP Predict GO terms from Neighborhoods
BP GO:1901527 abscisic acid-activated signaling pathway involved in stomatal movement IEP Predict GO terms from Neighborhoods
MF GO:1901567 fatty acid derivative binding IEP Predict GO terms from Neighborhoods
BP GO:1901700 response to oxygen-containing compound IEP Predict GO terms from Neighborhoods
BP GO:1902683 regulation of receptor localization to synapse IEP Predict GO terms from Neighborhoods
BP GO:1902684 negative regulation of receptor localization to synapse IEP Predict GO terms from Neighborhoods
BP GO:1903844 regulation of cellular response to transforming growth factor beta stimulus IEP Predict GO terms from Neighborhoods
BP GO:1904116 response to vasopressin IEP Predict GO terms from Neighborhoods
BP GO:1905957 regulation of cellular response to alcohol IEP Predict GO terms from Neighborhoods
MF GO:1990447 U2 snRNP binding IEP Predict GO terms from Neighborhoods
BP GO:1990573 potassium ion import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:2000311 regulation of AMPA receptor activity IEP Predict GO terms from Neighborhoods
BP GO:2001257 regulation of cation channel activity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003388 Reticulon 70 225
No external refs found!