SOLTUB.AGRIA.G00000011827

Description : 2-oxoglutarate and iron-dependent oxygenase JMJD4

Gene families : OG_02_0008575 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000011827
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_211

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	AHRD
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	AHRD
BP	GO:0006482	protein demethylation	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006909	phagocytosis	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008214	protein dealkylation	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0010468	regulation of gene expression	IEA	AHRD
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEA	AHRD
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
BP	GO:0016570	histone modification	IEA	AHRD
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	None	Extended
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	IEA	AHRD
BP	GO:0018126	protein hydroxylation	IEA	AHRD
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEA	AHRD
MF	GO:0032451	demethylase activity	IEA	AHRD
BP	GO:0032502	developmental process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043229	intracellular organelle	IEA	AHRD
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0048513	animal organ development	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEA	AHRD
BP	GO:0051179	localization	None	Extended
MF	GO:0051213	dioxygenase activity	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070988	demethylation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	IEA	AHRD
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	IEA	AHRD
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
BP	GO:0000281	mitotic cytokinesis	IEP	Predict GO terms from Neighborhoods
CC	GO:0000421	autophagosome membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0001578	microtubule bundle formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002090	regulation of receptor internalization	IEP	Predict GO terms from Neighborhoods
BP	GO:0002092	positive regulation of receptor internalization	IEP	Predict GO terms from Neighborhoods
CC	GO:0005741	mitochondrial outer membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0005778	peroxisomal membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0006029	proteoglycan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006493	protein O-linked glycosylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006626	protein targeting to mitochondrion	IEP	Predict GO terms from Neighborhoods
BP	GO:0006839	mitochondrial transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006906	vesicle fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0007032	endosome organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007052	mitotic spindle organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007409	axonogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0007411	axon guidance	IEP	Predict GO terms from Neighborhoods
BP	GO:0007611	learning or memory	IEP	Predict GO terms from Neighborhoods
BP	GO:0007612	learning	IEP	Predict GO terms from Neighborhoods
BP	GO:0007613	memory	IEP	Predict GO terms from Neighborhoods
BP	GO:0008088	axo-dendritic transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0008378	galactosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008568	microtubule severing ATPase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009100	glycoprotein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010048	vernalization response	IEP	Predict GO terms from Neighborhoods
MF	GO:0010314	phosphatidylinositol-5-phosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0010384	cell wall proteoglycan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010404	cell wall hydroxyproline-rich glycoprotein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010405	arabinogalactan protein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010458	exit from mitosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010970	transport along microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0016050	vesicle organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0018193	peptidyl-amino acid modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0018208	peptidyl-proline modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0018258	protein O-linked glycosylation via hydroxyproline	IEP	Predict GO terms from Neighborhoods
BP	GO:0021955	central nervous system neuron axonogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0022411	cellular component disassembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0030496	midbody	IEP	Predict GO terms from Neighborhoods
BP	GO:0030516	regulation of axon extension	IEP	Predict GO terms from Neighborhoods
BP	GO:0030705	cytoskeleton-dependent intracellular transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0031110	regulation of microtubule polymerization or depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031112	positive regulation of microtubule polymerization or depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031114	regulation of microtubule depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031117	positive regulation of microtubule depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031175	neuron projection development	IEP	Predict GO terms from Neighborhoods
CC	GO:0031410	cytoplasmic vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0031468	nuclear membrane reassembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0031903	microbody membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031982	vesicle	IEP	Predict GO terms from Neighborhoods
CC	GO:0031984	organelle subcompartment	IEP	Predict GO terms from Neighborhoods
MF	GO:0032266	phosphatidylinositol-3-phosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032465	regulation of cytokinesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0032467	positive regulation of cytokinesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0032506	cytokinetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032886	regulation of microtubule-based process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032984	protein-containing complex disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0032989	cellular component morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0032990	cell part morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0034214	protein hexamerization	IEP	Predict GO terms from Neighborhoods
MF	GO:0043014	alpha-tubulin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0043966	histone H3 acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043971	histone H3-K18 acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0044770	cell cycle phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:0044772	mitotic cell cycle phase transition	IEP	Predict GO terms from Neighborhoods
CC	GO:0045211	postsynaptic membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0045773	positive regulation of axon extension	IEP	Predict GO terms from Neighborhoods
BP	GO:0045807	positive regulation of endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048259	regulation of receptor-mediated endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048260	positive regulation of receptor-mediated endocytosis	IEP	Predict GO terms from Neighborhoods
MF	GO:0048487	beta-tubulin binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0048531	beta-1,3-galactosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048812	neuron projection morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048858	cell projection morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050769	positive regulation of neurogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050770	regulation of axonogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050772	positive regulation of axonogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050803	regulation of synapse structure or activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050805	negative regulation of synaptic transmission	IEP	Predict GO terms from Neighborhoods
BP	GO:0050890	cognition	IEP	Predict GO terms from Neighborhoods
BP	GO:0051013	microtubule severing	IEP	Predict GO terms from Neighborhoods
BP	GO:0051228	mitotic spindle disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0051230	spindle disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0051495	positive regulation of cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051781	positive regulation of cell division	IEP	Predict GO terms from Neighborhoods
BP	GO:0051962	positive regulation of nervous system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0051966	regulation of synaptic transmission, glutamatergic	IEP	Predict GO terms from Neighborhoods
BP	GO:0051967	negative regulation of synaptic transmission, glutamatergic	IEP	Predict GO terms from Neighborhoods
BP	GO:0061024	membrane organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0061025	membrane fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0061387	regulation of extent of cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0061640	cytoskeleton-dependent cytokinesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0061909	autophagosome-lysosome fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0061910	autophagosome-endosome fusion	IEP	Predict GO terms from Neighborhoods
MF	GO:0070273	phosphatidylinositol-4-phosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0070507	regulation of microtubule cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0070585	protein localization to mitochondrion	IEP	Predict GO terms from Neighborhoods
BP	GO:0070873	regulation of glycogen metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0071709	membrane assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0071763	nuclear membrane organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0071782	endoplasmic reticulum tubular network	IEP	Predict GO terms from Neighborhoods
BP	GO:0072655	establishment of protein localization to mitochondrion	IEP	Predict GO terms from Neighborhoods
BP	GO:0090148	membrane fission	IEP	Predict GO terms from Neighborhoods
BP	GO:0090174	organelle membrane fusion	IEP	Predict GO terms from Neighborhoods
CC	GO:0097060	synaptic membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0097352	autophagosome maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0097485	neuron projection guidance	IEP	Predict GO terms from Neighborhoods
CC	GO:0097708	intracellular vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0098930	axonal transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0099111	microtubule-based transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0099149	regulation of postsynaptic neurotransmitter receptor internalization	IEP	Predict GO terms from Neighborhoods
BP	GO:0120039	plasma membrane bounded cell projection morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0140318	protein transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140567	transmembrane protein dislocase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0140568	extraction of mislocalized protein from membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0140570	extraction of mislocalized protein from mitochondrial outer membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0140776	protein-containing complex destabilizing activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901535	regulation of DNA demethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1901537	positive regulation of DNA demethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1901879	regulation of protein depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:1901881	positive regulation of protein depolymerization	IEP	Predict GO terms from Neighborhoods
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1902850	microtubule cytoskeleton organization involved in mitosis	IEP	Predict GO terms from Neighborhoods
BP	GO:1902905	positive regulation of supramolecular fiber organization	IEP	Predict GO terms from Neighborhoods
BP	GO:1903008	organelle disassembly	IEP	Predict GO terms from Neighborhoods
MF	GO:1990714	hydroxyproline O-galactosyltransferase activity	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR041667	Cupin_8	20	272

External Links

No external refs found!

SOLTUB.AGRIA.G00000011827

Expression Profile

Co-expression Networks

Functional Annotation