SOLTUB.AGRIA.G00000011995


Description : E3 ubiquitin-protein ligase sis3


Gene families : OG_02_0013785 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000011995
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_46


Type GO Term Name Evidence Source
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEA AHRD
BP GO:0000578 embryonic axis specification IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA AHRD
BP GO:0006513 protein monoubiquitination IEA AHRD
MF GO:0008134 transcription factor binding IEA AHRD
CC GO:0009507 chloroplast IEA AHRD
BP GO:0010182 sugar mediated signaling pathway IEA AHRD
CC GO:0016021 integral component of membrane IEA AHRD
CC GO:0031982 vesicle IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
BP GO:0043433 negative regulation of DNA-binding transcription factor activity IEA AHRD
MF GO:0046872 metal ion binding IEA AHRD
BP GO:0051865 protein autoubiquitination IEA AHRD
BP GO:0060816 random inactivation of X chromosome IEA AHRD
MF GO:0061630 ubiquitin protein ligase activity IEA AHRD
BP GO:1900095 regulation of dosage compensation by inactivation of X chromosome IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000022 mitotic spindle elongation IEP Predict GO terms from Neighborhoods
MF GO:0000217 DNA secondary structure binding IEP Predict GO terms from Neighborhoods
CC GO:0000228 nuclear chromosome IEP Predict GO terms from Neighborhoods
CC GO:0000786 nucleosome IEP Predict GO terms from Neighborhoods
CC GO:0000793 condensed chromosome IEP Predict GO terms from Neighborhoods
CC GO:0000794 condensed nuclear chromosome IEP Predict GO terms from Neighborhoods
MF GO:0001221 transcription coregulator binding IEP Predict GO terms from Neighborhoods
CC GO:0001650 fibrillar center IEP Predict GO terms from Neighborhoods
BP GO:0001889 liver development IEP Predict GO terms from Neighborhoods
BP GO:0001947 heart looping IEP Predict GO terms from Neighborhoods
BP GO:0002119 nematode larval development IEP Predict GO terms from Neighborhoods
BP GO:0002164 larval development IEP Predict GO terms from Neighborhoods
BP GO:0003002 regionalization IEP Predict GO terms from Neighborhoods
BP GO:0003143 embryonic heart tube morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0003680 minor groove of adenine-thymine-rich DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Predict GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Predict GO terms from Neighborhoods
CC GO:0005700 polytene chromosome IEP Predict GO terms from Neighborhoods
CC GO:0005880 nuclear microtubule IEP Predict GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0006691 leukotriene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006692 prostanoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006693 prostaglandin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007010 cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0007017 microtubule-based process IEP Predict GO terms from Neighborhoods
BP GO:0007059 chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0007088 regulation of mitotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0007264 small GTPase mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0007349 cellularization IEP Predict GO terms from Neighborhoods
BP GO:0007517 muscle organ development IEP Predict GO terms from Neighborhoods
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Predict GO terms from Neighborhoods
BP GO:0008360 regulation of cell shape IEP Predict GO terms from Neighborhoods
CC GO:0009531 secondary cell wall IEP Predict GO terms from Neighborhoods
BP GO:0009952 anterior/posterior pattern specification IEP Predict GO terms from Neighborhoods
BP GO:0009960 endosperm development IEP Predict GO terms from Neighborhoods
BP GO:0010342 endosperm cellularization IEP Predict GO terms from Neighborhoods
BP GO:0010469 regulation of signaling receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0010528 regulation of transposition IEP Predict GO terms from Neighborhoods
BP GO:0010529 negative regulation of transposition IEP Predict GO terms from Neighborhoods
BP GO:0010962 regulation of glucan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010981 regulation of cell wall macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016574 histone ubiquitination IEP Predict GO terms from Neighborhoods
CC GO:0016604 nuclear body IEP Predict GO terms from Neighborhoods
CC GO:0016605 PML body IEP Predict GO terms from Neighborhoods
BP GO:0017157 regulation of exocytosis IEP Predict GO terms from Neighborhoods
MF GO:0019003 GDP binding IEP Predict GO terms from Neighborhoods
MF GO:0019789 SUMO transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0019900 kinase binding IEP Predict GO terms from Neighborhoods
MF GO:0019903 protein phosphatase binding IEP Predict GO terms from Neighborhoods
BP GO:0030097 hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:0030832 regulation of actin filament length IEP Predict GO terms from Neighborhoods
BP GO:0030833 regulation of actin filament polymerization IEP Predict GO terms from Neighborhoods
BP GO:0030834 regulation of actin filament depolymerization IEP Predict GO terms from Neighborhoods
CC GO:0030875 rDNA protrusion IEP Predict GO terms from Neighborhoods
BP GO:0031056 regulation of histone modification IEP Predict GO terms from Neighborhoods
BP GO:0031057 negative regulation of histone modification IEP Predict GO terms from Neighborhoods
BP GO:0031062 positive regulation of histone methylation IEP Predict GO terms from Neighborhoods
CC GO:0031371 ubiquitin conjugating enzyme complex IEP Predict GO terms from Neighborhoods
BP GO:0031401 positive regulation of protein modification process IEP Predict GO terms from Neighborhoods
MF GO:0031490 chromatin DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0031491 nucleosome binding IEP Predict GO terms from Neighborhoods
MF GO:0031492 nucleosomal DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0032093 SAM domain binding IEP Predict GO terms from Neighborhoods
BP GO:0032271 regulation of protein polymerization IEP Predict GO terms from Neighborhoods
MF GO:0032440 2-alkenal reductase [NAD(P)+] activity IEP Predict GO terms from Neighborhoods
MF GO:0032794 GTPase activating protein binding IEP Predict GO terms from Neighborhoods
BP GO:0032868 response to insulin IEP Predict GO terms from Neighborhoods
BP GO:0032869 cellular response to insulin stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032885 regulation of polysaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0032950 regulation of beta-glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032951 regulation of beta-glucan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0033043 regulation of organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0033143 regulation of intracellular steroid hormone receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0033145 positive regulation of intracellular steroid hormone receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0033233 regulation of protein sumoylation IEP Predict GO terms from Neighborhoods
BP GO:0033235 positive regulation of protein sumoylation IEP Predict GO terms from Neighborhoods
BP GO:0033559 unsaturated fatty acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Predict GO terms from Neighborhoods
CC GO:0035059 RCAF complex IEP Predict GO terms from Neighborhoods
BP GO:0035065 regulation of histone acetylation IEP Predict GO terms from Neighborhoods
BP GO:0035067 negative regulation of histone acetylation IEP Predict GO terms from Neighborhoods
BP GO:0035239 tube morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0035798 2-alkenal reductase (NADP+) activity IEP Predict GO terms from Neighborhoods
BP GO:0036102 leukotriene B4 metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0036132 13-prostaglandin reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0036185 13-lipoxin reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0036306 embryonic heart tube elongation IEP Predict GO terms from Neighborhoods
BP GO:0043122 regulation of I-kappaB kinase/NF-kappaB signaling IEP Predict GO terms from Neighborhoods
BP GO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling IEP Predict GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
BP GO:0043244 regulation of protein-containing complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0043282 pharyngeal muscle development IEP Predict GO terms from Neighborhoods
MF GO:0043398 HLH domain binding IEP Predict GO terms from Neighborhoods
MF GO:0043425 bHLH transcription factor binding IEP Predict GO terms from Neighborhoods
MF GO:0044388 small protein activating enzyme binding IEP Predict GO terms from Neighborhoods
CC GO:0044815 DNA packaging complex IEP Predict GO terms from Neighborhoods
BP GO:0045132 meiotic chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0045143 homologous chromosome segregation IEP Predict GO terms from Neighborhoods
CC GO:0045177 apical part of cell IEP Predict GO terms from Neighborhoods
BP GO:0045824 negative regulation of innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0048766 root hair initiation IEP Predict GO terms from Neighborhoods
BP GO:0048872 homeostasis of number of cells IEP Predict GO terms from Neighborhoods
BP GO:0051091 positive regulation of DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0051231 spindle elongation IEP Predict GO terms from Neighborhoods
BP GO:0051301 cell division IEP Predict GO terms from Neighborhoods
BP GO:0051570 regulation of histone H3-K9 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051574 positive regulation of histone H3-K9 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051648 vesicle localization IEP Predict GO terms from Neighborhoods
BP GO:0051650 establishment of vesicle localization IEP Predict GO terms from Neighborhoods
MF GO:0052579 (+)-pulegone reductase, (+)-isomenthone as substrate, activity IEP Predict GO terms from Neighborhoods
MF GO:0052580 (+)-pulegone reductase, (-)-menthone as substrate, activity IEP Predict GO terms from Neighborhoods
BP GO:0060216 definitive hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:0060562 epithelial tube morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0061061 muscle structure development IEP Predict GO terms from Neighborhoods
BP GO:0061484 hematopoietic stem cell homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0061631 ubiquitin conjugating enzyme activity IEP Predict GO terms from Neighborhoods
MF GO:0061650 ubiquitin-like protein conjugating enzyme activity IEP Predict GO terms from Neighborhoods
MF GO:0061656 SUMO conjugating enzyme activity IEP Predict GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Predict GO terms from Neighborhoods
MF GO:0070402 NADPH binding IEP Predict GO terms from Neighborhoods
BP GO:0071375 cellular response to peptide hormone stimulus IEP Predict GO terms from Neighborhoods
MF GO:0071535 RING-like zinc finger domain binding IEP Predict GO terms from Neighborhoods
MF GO:0097257 leukotriene B4 12-hydroxy dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0097327 response to antineoplastic agent IEP Predict GO terms from Neighborhoods
BP GO:0098813 nuclear chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0110053 regulation of actin filament organization IEP Predict GO terms from Neighborhoods
BP GO:1900109 regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900111 positive regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1901879 regulation of protein depolymerization IEP Predict GO terms from Neighborhoods
BP GO:1901983 regulation of protein acetylation IEP Predict GO terms from Neighborhoods
BP GO:1901984 negative regulation of protein acetylation IEP Predict GO terms from Neighborhoods
BP GO:1903182 regulation of SUMO transferase activity IEP Predict GO terms from Neighborhoods
BP GO:1903755 positive regulation of SUMO transferase activity IEP Predict GO terms from Neighborhoods
CC GO:1990356 sumoylated E2 ligase complex IEP Predict GO terms from Neighborhoods
BP GO:2000756 regulation of peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
BP GO:2000757 negative regulation of peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
BP GO:2001006 regulation of cellulose biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2001009 regulation of plant-type cell wall cellulose biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2001300 lipoxin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:2001302 lipoxin A4 metabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001841 Znf_RING 234 276
No external refs found!