SOLTUB.AGRIA.G00000012097

Description : Glucan endo-1,3-beta-glucosidase-like protein 3

Gene families : OG_02_0013814 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000012097
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_233

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	None	Extended
MF	GO:0001872	(1->3)-beta-D-glucan binding	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	None	Extended
BP	GO:0006076	(1->3)-beta-D-glucan catabolic process	IEA	AHRD
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008422	beta-glucosidase activity	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009251	glucan catabolic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009408	response to heat	IEA	AHRD
CC	GO:0009506	plasmodesma	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015926	glucosidase activity	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
CC	GO:0030054	cell junction	None	Extended
MF	GO:0030246	carbohydrate binding	None	Extended
MF	GO:0030247	polysaccharide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031225	anchored component of membrane	None	Extended
CC	GO:0031226	intrinsic component of plasma membrane	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IEA	AHRD
MF	GO:0042973	glucan endo-1,3-beta-D-glucosidase activity	IEA	AHRD
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	IEA	AHRD
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044247	cellular polysaccharide catabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0044275	cellular carbohydrate catabolic process	None	Extended
CC	GO:0046658	anchored component of plasma membrane	IEA	AHRD
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051275	beta-glucan catabolic process	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000209	protein polyubiquitination	IEP	Predict GO terms from Neighborhoods
MF	GO:0000702	oxidized base lesion DNA N-glycosylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0000820	regulation of glutamine family amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0003684	damaged DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005154	epidermal growth factor receptor binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006284	base-excision repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0006521	regulation of cellular amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008270	zinc ion binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008534	oxidized purine nucleobase lesion DNA N-glycosylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009938	negative regulation of gibberellic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Predict GO terms from Neighborhoods
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019104	DNA N-glycosylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030104	water homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0033238	regulation of cellular amine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033239	negative regulation of cellular amine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045763	negative regulation of cellular amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046914	transition metal ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0060147	regulation of post-transcriptional gene silencing	IEP	Predict GO terms from Neighborhoods
BP	GO:0060148	positive regulation of post-transcriptional gene silencing	IEP	Predict GO terms from Neighborhoods
BP	GO:0060964	regulation of miRNA-mediated gene silencing	IEP	Predict GO terms from Neighborhoods
BP	GO:0060966	regulation of gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0062014	negative regulation of small molecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0070534	protein K63-linked ubiquitination	IEP	Predict GO terms from Neighborhoods
MF	GO:0070851	growth factor receptor binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0070936	protein K48-linked ubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0090378	seed trichome elongation	IEP	Predict GO terms from Neighborhoods
MF	GO:0140078	class I DNA-(apurinic or apyrimidinic site) endonuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1900368	regulation of post-transcriptional gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
BP	GO:1900370	positive regulation of post-transcriptional gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
BP	GO:1902005	regulation of proline biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902006	negative regulation of proline biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000070	regulation of response to water deprivation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000214	regulation of proline metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000215	negative regulation of proline metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000282	regulation of cellular amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000283	negative regulation of cellular amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000637	positive regulation of miRNA-mediated gene silencing	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR012946	X8	21	90

External Links

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SOLTUB.AGRIA.G00000012097

Expression Profile

Co-expression Networks

Functional Annotation