Description : nuclear RNA polymerase D1A
Gene families : OG_02_0008659 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000012176 | |
Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_522 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005634 | nucleus | IEA | AHRD |
BP | GO:0009793 | embryo development ending in seed dormancy | IEA | AHRD |
BP | GO:0017126 | nucleologenesis | IEA | AHRD |
BP | GO:0051302 | regulation of cell division | IEA | AHRD |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000303 | response to superoxide | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000305 | response to oxygen radical | IEP | Predict GO terms from Neighborhoods |
BP | GO:0001817 | regulation of cytokine production | IEP | Predict GO terms from Neighborhoods |
BP | GO:0001818 | negative regulation of cytokine production | IEP | Predict GO terms from Neighborhoods |
BP | GO:0003254 | regulation of membrane depolarization | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003676 | nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003677 | DNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003723 | RNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003729 | mRNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006259 | DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006260 | DNA replication | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006282 | regulation of DNA repair | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006284 | base-excision repair | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006304 | DNA modification | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006471 | protein ADP-ribosylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0007167 | enzyme-linked receptor protein signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:0007178 | transmembrane receptor protein serine/threonine kinase signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:0007179 | transforming growth factor beta receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:0007610 | behavior | IEP | Predict GO terms from Neighborhoods |
CC | GO:0009295 | nucleoid | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010043 | response to zinc ion | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010212 | response to ionizing radiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010332 | response to gamma radiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010611 | regulation of cardiac muscle hypertrophy | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010613 | positive regulation of cardiac muscle hypertrophy | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010638 | positive regulation of organelle organization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010639 | negative regulation of organelle organization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010990 | regulation of SMAD protein complex assembly | IEP | Predict GO terms from Neighborhoods |
BP | GO:0014742 | positive regulation of muscle hypertrophy | IEP | Predict GO terms from Neighborhoods |
BP | GO:0014743 | regulation of muscle hypertrophy | IEP | Predict GO terms from Neighborhoods |
BP | GO:0016311 | dephosphorylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0016485 | protein processing | IEP | Predict GO terms from Neighborhoods |
BP | GO:0016540 | protein autoprocessing | IEP | Predict GO terms from Neighborhoods |
MF | GO:0016763 | pentosyltransferase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0016922 | nuclear receptor binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0023019 | signal transduction involved in regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
MF | GO:0030331 | nuclear estrogen receptor binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0030534 | adult behavior | IEP | Predict GO terms from Neighborhoods |
BP | GO:0031960 | response to corticosteroid | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032042 | mitochondrial DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032204 | regulation of telomere maintenance | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032205 | negative regulation of telomere maintenance | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032206 | positive regulation of telomere maintenance | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032660 | regulation of interleukin-17 production | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032700 | negative regulation of interleukin-17 production | IEP | Predict GO terms from Neighborhoods |
BP | GO:0033044 | regulation of chromosome organization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0033143 | regulation of intracellular steroid hormone receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:0033145 | positive regulation of intracellular steroid hormone receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:0033146 | regulation of intracellular estrogen receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:0033148 | positive regulation of intracellular estrogen receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:0034599 | cellular response to oxidative stress | IEP | Predict GO terms from Neighborhoods |
BP | GO:0034614 | cellular response to reactive oxygen species | IEP | Predict GO terms from Neighborhoods |
BP | GO:0035510 | DNA dealkylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0040009 | regulation of growth rate | IEP | Predict GO terms from Neighborhoods |
BP | GO:0042391 | regulation of membrane potential | IEP | Predict GO terms from Neighborhoods |
BP | GO:0042769 | obsolete DNA damage response, detection of DNA damage | IEP | Predict GO terms from Neighborhoods |
MF | GO:0042826 | histone deacetylase binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043254 | regulation of protein-containing complex assembly | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043388 | positive regulation of DNA binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043502 | regulation of muscle adaptation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043523 | regulation of neuron apoptotic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0044030 | regulation of DNA methylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0044057 | regulation of system process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0044728 | DNA methylation or demethylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045597 | positive regulation of cell differentiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045739 | positive regulation of DNA repair | IEP | Predict GO terms from Neighborhoods |
MF | GO:0046332 | SMAD binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0046403 | polynucleotide 3'-phosphatase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0046404 | polydeoxyribonucleotide 5'-hydroxyl-kinase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0046939 | nucleotide phosphorylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0048148 | behavioral response to cocaine | IEP | Predict GO terms from Neighborhoods |
BP | GO:0048545 | response to steroid hormone | IEP | Predict GO terms from Neighborhoods |
BP | GO:0050877 | nervous system process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0050879 | multicellular organismal movement | IEP | Predict GO terms from Neighborhoods |
BP | GO:0050881 | musculoskeletal movement | IEP | Predict GO terms from Neighborhoods |
BP | GO:0050882 | voluntary musculoskeletal movement | IEP | Predict GO terms from Neighborhoods |
BP | GO:0050905 | neuromuscular process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051053 | negative regulation of DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051054 | positive regulation of DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051098 | regulation of binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051099 | positive regulation of binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051101 | regulation of DNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0051287 | NAD binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051385 | response to mineralocorticoid | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051604 | protein maturation | IEP | Predict GO terms from Neighborhoods |
MF | GO:0051731 | polynucleotide 5'-hydroxyl-kinase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0051733 | polydeoxyribonucleotide kinase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0051734 | polynucleotide kinase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051881 | regulation of mitochondrial membrane potential | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051900 | regulation of mitochondrial depolarization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051901 | positive regulation of mitochondrial depolarization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0060390 | regulation of SMAD protein signal transduction | IEP | Predict GO terms from Neighborhoods |
BP | GO:0060391 | positive regulation of SMAD protein signal transduction | IEP | Predict GO terms from Neighborhoods |
MF | GO:0061629 | RNA polymerase II-specific DNA-binding transcription factor binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0070212 | protein poly-ADP-ribosylation | IEP | Predict GO terms from Neighborhoods |
MF | GO:0070412 | R-SMAD binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0070988 | demethylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071241 | cellular response to inorganic substance | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071248 | cellular response to metal ion | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071294 | cellular response to zinc ion | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071417 | cellular response to organonitrogen compound | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071450 | cellular response to oxygen radical | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071451 | cellular response to superoxide | IEP | Predict GO terms from Neighborhoods |
BP | GO:0080111 | DNA demethylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0090092 | regulation of transmembrane receptor protein serine/threonine kinase signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:0090100 | positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:0090257 | regulation of muscle system process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
CC | GO:0090734 | site of DNA damage | IEP | Predict GO terms from Neighborhoods |
MF | GO:0140297 | DNA-binding transcription factor binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:1900180 | regulation of protein localization to nucleus | IEP | Predict GO terms from Neighborhoods |
BP | GO:1900182 | positive regulation of protein localization to nucleus | IEP | Predict GO terms from Neighborhoods |
BP | GO:1900407 | regulation of cellular response to oxidative stress | IEP | Predict GO terms from Neighborhoods |
BP | GO:1901214 | regulation of neuron death | IEP | Predict GO terms from Neighborhoods |
BP | GO:1901216 | positive regulation of neuron death | IEP | Predict GO terms from Neighborhoods |
BP | GO:1901652 | response to peptide | IEP | Predict GO terms from Neighborhoods |
BP | GO:1901653 | cellular response to peptide | IEP | Predict GO terms from Neighborhoods |
BP | GO:1901654 | response to ketone | IEP | Predict GO terms from Neighborhoods |
BP | GO:1902175 | regulation of oxidative stress-induced intrinsic apoptotic signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:1902882 | regulation of response to oxidative stress | IEP | Predict GO terms from Neighborhoods |
BP | GO:1903201 | regulation of oxidative stress-induced cell death | IEP | Predict GO terms from Neighborhoods |
BP | GO:1903203 | regulation of oxidative stress-induced neuron death | IEP | Predict GO terms from Neighborhoods |
BP | GO:1903376 | regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:1903516 | regulation of single strand break repair | IEP | Predict GO terms from Neighborhoods |
BP | GO:1903518 | positive regulation of single strand break repair | IEP | Predict GO terms from Neighborhoods |
BP | GO:1903829 | positive regulation of protein localization | IEP | Predict GO terms from Neighborhoods |
BP | GO:1904044 | response to aldosterone | IEP | Predict GO terms from Neighborhoods |
BP | GO:1904181 | positive regulation of membrane depolarization | IEP | Predict GO terms from Neighborhoods |
BP | GO:1904356 | regulation of telomere maintenance via telomere lengthening | IEP | Predict GO terms from Neighborhoods |
BP | GO:1904357 | negative regulation of telomere maintenance via telomere lengthening | IEP | Predict GO terms from Neighborhoods |
BP | GO:1904645 | response to amyloid-beta | IEP | Predict GO terms from Neighborhoods |
BP | GO:1904646 | cellular response to amyloid-beta | IEP | Predict GO terms from Neighborhoods |
BP | GO:1904760 | regulation of myofibroblast differentiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:1904762 | positive regulation of myofibroblast differentiation | IEP | Predict GO terms from Neighborhoods |
MF | GO:1990404 | NAD+-protein ADP-ribosyltransferase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:2000278 | regulation of DNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:2000573 | positive regulation of DNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:2000677 | regulation of transcription regulatory region DNA binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:2000679 | positive regulation of transcription regulatory region DNA binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:2000779 | regulation of double-strand break repair | IEP | Predict GO terms from Neighborhoods |
BP | GO:2000781 | positive regulation of double-strand break repair | IEP | Predict GO terms from Neighborhoods |
BP | GO:2001020 | regulation of response to DNA damage stimulus | IEP | Predict GO terms from Neighborhoods |
BP | GO:2001022 | positive regulation of response to DNA damage stimulus | IEP | Predict GO terms from Neighborhoods |
BP | GO:2001233 | regulation of apoptotic signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:2001242 | regulation of intrinsic apoptotic signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:2001251 | negative regulation of chromosome organization | IEP | Predict GO terms from Neighborhoods |
BP | GO:2001252 | positive regulation of chromosome organization | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
No external refs found! |