SOLTUB.AGRIA.G00000000115

Description : Disease resistance protein (CC-NBS-LRR class) family

Gene families : OG_02_0000310 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000000115
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_223

Target	Alias	Description	ECC score	Gene Family Method
SOLTUB.AGRIA.G00000000051	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.08	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000000053	No alias	Disease resistance protein	0.25	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000000057	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.14	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000000051	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.08	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000000053	No alias	Disease resistance protein	0.25	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000000057	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.14	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000000051	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.08	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000000053	No alias	Disease resistance protein	0.25	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000000057	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.14	Orthogroups with 8 Potato genotypes

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
CC	GO:0016020	membrane	IEA	AHRD
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0098542	defense response to other organism	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0002376	immune system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006955	immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0008219	cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0009314	response to radiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009416	response to light stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009626	plant-type hypersensitive response	IEP	Predict GO terms from Neighborhoods
BP	GO:0009960	endosperm development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010483	pollen tube reception	IEP	Predict GO terms from Neighborhoods
BP	GO:0012501	programmed cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0030004	cellular monovalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030308	negative regulation of cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0032922	circadian regulation of gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0034050	programmed cell death induced by symbiont	IEP	Predict GO terms from Neighborhoods
CC	GO:0035838	growing cell tip	IEP	Predict GO terms from Neighborhoods
MF	GO:0043531	ADP binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0043680	filiform apparatus	IEP	Predict GO terms from Neighborhoods
BP	GO:0044403	biological process involved in symbiotic interaction	IEP	Predict GO terms from Neighborhoods
BP	GO:0045087	innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0051702	biological process involved in interaction with symbiont	IEP	Predict GO terms from Neighborhoods
BP	GO:0051924	regulation of calcium ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0080092	regulation of pollen tube growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0080147	root hair cell development	IEP	Predict GO terms from Neighborhoods
CC	GO:0090404	pollen tube tip	IEP	Predict GO terms from Neighborhoods
BP	GO:0097272	ammonium homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0097275	cellular ammonium homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:1901265	nucleoside phosphate binding	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	213	376
IPR002182	NB-ARC	865	1043
IPR027417	P-loop_NTPase	864	1056
IPR027417	P-loop_NTPase	144	388

External Links

No external refs found!

SOLTUB.AGRIA.G00000000115

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation