| MF | GO:0000156 | phosphorelay response regulator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002831 | regulation of response to biotic stimulus | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004683 | calmodulin-dependent protein kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004713 | protein tyrosine kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004722 | protein serine/threonine phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005634 | nucleus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005737 | cytoplasm | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007165 | signal transduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007167 | enzyme-linked receptor protein signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007178 | transmembrane receptor protein serine/threonine kinase signaling pathway | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009873 | ethylene-activated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009937 | regulation of gibberellic acid mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009939 | positive regulation of gibberellic acid mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010082 | regulation of root meristem growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010150 | leaf senescence | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010380 | regulation of chlorophyll biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010492 | maintenance of shoot apical meristem identity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010769 | regulation of cell morphogenesis involved in differentiation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010857 | calcium-dependent protein kinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016579 | protein deubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018105 | peptidyl-serine phosphorylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018209 | peptidyl-serine modification | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019902 | phosphatase binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019903 | protein phosphatase binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031537 | regulation of anthocyanin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032101 | regulation of response to external stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035556 | intracellular signal transduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040008 | regulation of growth | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048638 | regulation of developmental growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060688 | regulation of morphogenesis of a branching structure | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070848 | response to growth factor | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071215 | cellular response to abscisic acid stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071310 | cellular response to organic substance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071363 | cellular response to growth factor stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071495 | cellular response to endogenous stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080022 | primary root development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080036 | regulation of cytokinin-activated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080092 | regulation of pollen tube growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080113 | regulation of seed growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090056 | regulation of chlorophyll metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090693 | plant organ senescence | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097306 | cellular response to alcohol | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0101005 | deubiquitinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900425 | negative regulation of defense response to bacterium | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901401 | regulation of tetrapyrrole metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901463 | regulation of tetrapyrrole biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905428 | regulation of plant organ formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990110 | callus formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000022 | regulation of jasmonic acid mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000031 | regulation of salicylic acid mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000032 | regulation of secondary shoot formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000241 | regulation of reproductive process | IEP | Predict GO terms from Neighborhoods |