SOLTUB.AGRIA.G00000012887

Description : Peroxisomal (S)-2-hydroxy-acid oxidase

Gene families : OG_02_0021614 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000012887
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_91

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0001561	fatty acid alpha-oxidation	IEA	AHRD
BP	GO:0002218	activation of innate immune response	None	Extended
BP	GO:0002253	activation of immune response	None	Extended
BP	GO:0002376	immune system process	None	Extended
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002684	positive regulation of immune system process	None	Extended
BP	GO:0002757	immune response-activating signal transduction	None	Extended
BP	GO:0002758	innate immune response-activating signal transduction	IEA	AHRD
BP	GO:0002764	immune response-regulating signaling pathway	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
BP	GO:0002833	positive regulation of response to biotic stimulus	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005777	peroxisome	IEA	AHRD
CC	GO:0005840	ribosome	None	Extended
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006066	alcohol metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009062	fatty acid catabolic process	None	Extended
BP	GO:0009441	glycolate metabolic process	None	Extended
CC	GO:0009506	plasmodesma	IEA	AHRD
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009570	chloroplast stroma	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009853	photorespiration	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010109	regulation of photosynthesis	IEA	AHRD
MF	GO:0010181	FMN binding	IEA	AHRD
BP	GO:0016032	viral process	None	Extended
BP	GO:0016042	lipid catabolic process	None	Extended
BP	GO:0016054	organic acid catabolic process	None	Extended
BP	GO:0019048	modulation by virus of host process	IEA	AHRD
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019395	fatty acid oxidation	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
CC	GO:0022626	cytosolic ribosome	IEA	AHRD
CC	GO:0030054	cell junction	None	Extended
BP	GO:0030258	lipid modification	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031349	positive regulation of defense response	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032103	positive regulation of response to external stimulus	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0034308	primary alcohol metabolic process	None	Extended
BP	GO:0034310	primary alcohol catabolic process	None	Extended
BP	GO:0034440	lipid oxidation	None	Extended
BP	GO:0035821	modulation of process of another organism	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
CC	GO:0042579	microbody	None	Extended
BP	GO:0042742	defense response to bacterium	IEA	AHRD
BP	GO:0042743	hydrogen peroxide metabolic process	None	Extended
BP	GO:0043094	cellular metabolic compound salvage	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044003	modulation by symbiont of host process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044242	cellular lipid catabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0044403	biological process involved in symbiotic interaction	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045089	positive regulation of innate immune response	None	Extended
BP	GO:0046164	alcohol catabolic process	None	Extended
BP	GO:0046296	glycolate catabolic process	IEA	AHRD
BP	GO:0046395	carboxylic acid catabolic process	None	Extended
CC	GO:0048046	apoplast	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0050665	hydrogen peroxide biosynthetic process	IEA	AHRD
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050778	positive regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051701	biological process involved in interaction with host	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072329	monocarboxylic acid catabolic process	None	Extended
BP	GO:0072593	reactive oxygen species metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901616	organic hydroxy compound catabolic process	None	Extended
BP	GO:1903409	reactive oxygen species biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003008	system process	IEP	Predict GO terms from Neighborhoods
MF	GO:0005372	water transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006811	ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006812	cation transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006833	water transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0012505	endomembrane system	IEP	Predict GO terms from Neighborhoods
MF	GO:0015267	channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022803	passive transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022857	transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030104	water homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0042044	fluid transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0042995	cell projection	IEP	Predict GO terms from Neighborhoods
BP	GO:0048513	animal organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0055085	transmembrane transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0098590	plasma membrane region	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000262	FMN-dep_DH	94	308
IPR000262	FMN-dep_DH	15	64

External Links

No external refs found!

SOLTUB.AGRIA.G00000012887

Expression Profile

Co-expression Networks

Functional Annotation