Description : Late blight resistance protein Rpi-amr3
Gene families : OG_02_0000581 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000013148 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_132 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| SOLTUB.AGRIA.G00000013871 | No alias | Disease resistance protein (CC-NBS-LRR class) family | 0.04 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000013873 | No alias | Disease resistance protein (CC-NBS-LRR class) family | 0.03 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000013871 | No alias | Disease resistance protein (CC-NBS-LRR class) family | 0.04 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000013873 | No alias | Disease resistance protein (CC-NBS-LRR class) family | 0.03 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000013871 | No alias | Disease resistance protein (CC-NBS-LRR class) family | 0.04 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000013873 | No alias | Disease resistance protein (CC-NBS-LRR class) family | 0.03 | Orthogroups with 8 Potato genotypes |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001523 | retinoid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002218 | activation of innate immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002252 | immune effector process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004112 | cyclic-nucleotide phosphodiesterase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005794 | Golgi apparatus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006082 | organic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006706 | steroid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006775 | fat-soluble vitamin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008146 | sulfotransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008202 | steroid metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008395 | steroid hydroxylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009708 | benzyl isoquinoline alkaloid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009719 | response to endogenous stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009725 | response to hormone | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009735 | response to cytokinin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009751 | response to salicylic acid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009753 | response to jasmonic acid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009812 | flavonoid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009864 | induced systemic resistance, jasmonic acid mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009867 | jasmonic acid mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009934 | regulation of meristem structural organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010046 | response to mycotoxin | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010279 | indole-3-acetic acid amido synthetase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010817 | regulation of hormone levels | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0014070 | response to organic cyclic compound | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016109 | tetraterpenoid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016117 | carotenoid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016128 | phytosteroid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016131 | brassinosteroid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016143 | S-glycoside metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016144 | S-glycoside biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016782 | transferase activity, transferring sulphur-containing groups | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016999 | antibiotic metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0017000 | antibiotic biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018117 | protein adenylylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018175 | protein nucleotidylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019748 | secondary metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019757 | glycosinolate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019758 | glycosinolate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019760 | glucosinolate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019761 | glucosinolate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032260 | response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033993 | response to lipid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034340 | response to type I interferon | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042359 | vitamin D metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042445 | hormone metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044550 | secondary metabolite biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046445 | benzyl isoquinoline alkaloid metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047364 | desulfoglucosinolate sulfotransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0050467 | pentalenene synthase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0050593 | N-methylcoclaurine 3'-monooxygenase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051176 | positive regulation of sulfur metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0052318 | regulation of phytoalexin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0052319 | regulation of phytoalexin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0052320 | positive regulation of phytoalexin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0052322 | positive regulation of phytoalexin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070542 | response to fatty acid | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070728 | leucine binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071357 | cellular response to type I interferon | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071497 | cellular response to freezing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0080066 | 3-methylthiopropyl-desulfoglucosinolate sulfotransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0080067 | 4-methylthiobutyl-desulfoglucosinolate sulfotransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0080068 | 5-methylthiopentyl-desulfoglucosinolate sulfotransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0080069 | 7-methylthioheptyl-desulfoglucosinolate sulfotransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0080070 | 8-methylthiooctyl-desulfoglucosinolate sulfotransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0080071 | indol-3-yl-methyl-desulfoglucosinolate sulfotransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0080118 | brassinosteroid sulfotransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0080131 | hydroxyjasmonate sulfotransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0102053 | (-)-jasmonoyl-isoleucine synthetase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0102057 | jasmonoyl-valine synthetase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0102058 | jasmonoyl-leucine synthetase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901010 | (S)-reticuline metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901012 | (S)-reticuline biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901182 | regulation of camalexin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901183 | positive regulation of camalexin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901659 | glycosyl compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990135 | flavonoid sulfotransferase activity | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |