| BP | GO:0000075 | cell cycle checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000076 | DNA replication checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000228 | nuclear chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000793 | condensed chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000794 | condensed nuclear chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0001673 | male germ cell nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001763 | morphogenesis of a branching structure | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003677 | DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003682 | chromatin binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004620 | phospholipase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004806 | triglyceride lipase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006275 | regulation of DNA replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006448 | regulation of translational elongation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006638 | neutral lipid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006639 | acylglycerol metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007602 | phototransduction | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008970 | phospholipase A1 activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009314 | response to radiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009416 | response to light stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009581 | detection of external stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009582 | detection of abiotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009583 | detection of light stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009585 | red, far-red light phototransduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009638 | phototropism | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009639 | response to red or far red light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009641 | shade avoidance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009645 | response to low light intensity stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009692 | ethylene metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009693 | ethylene biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009704 | de-etiolation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009740 | gibberellic acid mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009742 | brassinosteroid mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009785 | blue light signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010017 | red or far-red light signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010029 | regulation of seed germination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010047 | fruit dehiscence | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010099 | regulation of photomorphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010109 | regulation of photosynthesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010161 | red light signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010187 | negative regulation of seed germination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010212 | response to ionizing radiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010218 | response to far red light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010223 | secondary shoot formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010244 | response to low fluence blue light stimulus by blue low-fluence system | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010346 | shoot axis formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010468 | regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010476 | gibberellin mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010600 | regulation of auxin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0015629 | actin cytoskeleton | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0015935 | small ribosomal subunit | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016605 | PML body | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019222 | regulation of metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019915 | lipid storage | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0022627 | cytosolic small ribosomal subunit | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030174 | regulation of DNA-templated DNA replication initiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030522 | intracellular receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031537 | regulation of anthocyanin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031539 | positive regulation of anthocyanin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031570 | DNA integrity checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032350 | regulation of hormone metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033135 | regulation of peptidyl-serine phosphorylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033138 | positive regulation of peptidyl-serine phosphorylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033365 | protein localization to organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033674 | positive regulation of kinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034502 | protein localization to chromosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035561 | regulation of chromatin binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035563 | positive regulation of chromatin binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043022 | ribosome binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043024 | ribosomal small subunit binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043073 | germ cell nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043449 | cellular alkene metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043450 | alkene biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045036 | protein targeting to chloroplast | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045860 | positive regulation of protein kinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045900 | negative regulation of translational elongation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046339 | diacylglycerol metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046340 | diacylglycerol catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046461 | neutral lipid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046462 | monoacylglycerol metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046464 | acylglycerol catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046503 | glycerolipid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046885 | regulation of hormone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047372 | acylglycerol lipase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047714 | galactolipase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048235 | pollen sperm cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048440 | carpel development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048519 | negative regulation of biological process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048580 | regulation of post-embryonic development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048581 | negative regulation of post-embryonic development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051093 | negative regulation of developmental process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051099 | positive regulation of binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051239 | regulation of multicellular organismal process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051241 | negative regulation of multicellular organismal process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0052651 | monoacylglycerol catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071163 | DNA replication preinitiation complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071165 | GINS complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071168 | protein localization to chromatin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071483 | cellular response to blue light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071489 | cellular response to red or far red light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071491 | cellular response to red light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072596 | establishment of protein localization to chloroplast | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072598 | protein localization to chloroplast | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080006 | internode patterning | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080113 | regulation of seed growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090227 | regulation of red or far-red light signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090229 | negative regulation of red or far-red light signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090329 | regulation of DNA-templated DNA replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090354 | regulation of auxin metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140110 | transcription regulator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900140 | regulation of seedling development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900673 | olefin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900674 | olefin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990841 | promoter-specific chromatin binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000026 | regulation of multicellular organismal development | IEP | Predict GO terms from Neighborhoods |