SOLTUB.AGRIA.G00000013443

Description : Disease resistance protein RPP8

Gene families : OG_02_0000023 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000013443
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_103

Target	Alias	Description	ECC score	Gene Family Method
SOLTUB.AGRIA.G00000013422	No alias	Hero resistance protein	0.11	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000013425	No alias	Disease resistance protein	0.09	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000013422	No alias	Hero resistance protein	0.11	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000013425	No alias	Disease resistance protein	0.09	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000013422	No alias	Hero resistance protein	0.11	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000013425	No alias	Disease resistance protein	0.09	Orthogroups with 8 Potato genotypes

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0098542	defense response to other organism	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	IEA	AHRD

Type	GO Term	Name	Evidence	Source
MF	GO:0008169	C-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008171	O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052624	2-phytyl-1,4-naphthoquinone methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0080150	S-adenosyl-L-methionine:benzoic acid carboxyl methyl transferase activity	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	155	389
IPR027417	P-loop_NTPase	136	402

External Links

No external refs found!