SOLTUB.AGRIA.G00000013618

Description : ATP-dependent Clp protease proteolytic subunit

Gene families : OG_02_0014094 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000013618
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_544

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004176	ATP-dependent peptidase activity	IEA	AHRD
MF	GO:0004252	serine-type endopeptidase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	IEA	AHRD
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
MF	GO:0008270	zinc ion binding	IEA	AHRD
CC	GO:0009368	endopeptidase Clp complex	None	Extended
CC	GO:0009535	chloroplast thylakoid membrane	IEA	AHRD
CC	GO:0009840	chloroplastic endopeptidase Clp complex	IEA	AHRD
CC	GO:0016020	membrane	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0050897	cobalt ion binding	IEA	AHRD
MF	GO:0051117	ATPase binding	IEA	AHRD
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0005216	ion channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005244	voltage-gated ion channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005253	anion channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Predict GO terms from Neighborhoods
BP	GO:0006820	anion transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0008308	voltage-gated anion channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008509	anion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009060	aerobic respiration	IEP	Predict GO terms from Neighborhoods
CC	GO:0009526	plastid envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0009527	plastid outer membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0009626	plant-type hypersensitive response	IEP	Predict GO terms from Neighborhoods
CC	GO:0009941	chloroplast envelope	IEP	Predict GO terms from Neighborhoods
BP	GO:0010029	regulation of seed germination	IEP	Predict GO terms from Neighborhoods
BP	GO:0012501	programmed cell death	IEP	Predict GO terms from Neighborhoods
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015267	channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015288	porin activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015698	inorganic anion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	Predict GO terms from Neighborhoods
CC	GO:0019867	outer membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0022803	passive transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022829	wide pore channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022832	voltage-gated channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022836	gated channel activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031301	integral component of organelle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031306	intrinsic component of mitochondrial outer membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031307	integral component of mitochondrial outer membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031968	organelle outer membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0032592	integral component of mitochondrial membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0034050	programmed cell death induced by symbiont	IEP	Predict GO terms from Neighborhoods
BP	GO:0045333	cellular respiration	IEP	Predict GO terms from Neighborhoods
CC	GO:0046930	pore complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0051702	biological process involved in interaction with symbiont	IEP	Predict GO terms from Neighborhoods
CC	GO:0098573	intrinsic component of mitochondrial membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0098656	anion transmembrane transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0098796	membrane protein complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1900140	regulation of seedling development	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR029045	ClpP/crotonase-like_dom_sf	35	218
IPR023562	ClpP/TepA	37	216

External Links

No external refs found!

SOLTUB.AGRIA.G00000013618

Expression Profile

Co-expression Networks

Functional Annotation