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  5. SOLTUB.AGRIA.G00000013872

SOLTUB.AGRIA.G00000013872


Description : Disease resistance protein (CC-NBS-LRR class) family


Gene families : OG_02_0000020 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000013872
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_28

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000013162 No alias Disease resistance protein RPS5 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000013176 No alias Disease resistance protein (CC-NBS-LRR class) family 0.5 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000013177 No alias Disease resistance protein (CC-NBS-LRR class) family 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000013162 No alias Disease resistance protein RPS5 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000013176 No alias Disease resistance protein (CC-NBS-LRR class) family 0.5 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000013177 No alias Disease resistance protein (CC-NBS-LRR class) family 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000013162 No alias Disease resistance protein RPS5 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000013176 No alias Disease resistance protein (CC-NBS-LRR class) family 0.5 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000013177 No alias Disease resistance protein (CC-NBS-LRR class) family 0.33 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
MF GO:0005488 binding IEA AHRD
BP GO:0006952 defense response IEA AHRD
CC GO:0110165 cellular anatomical entity IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0002238 response to molecule of fungal origin IEP Predict GO terms from Neighborhoods
CC GO:0005886 plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0009607 response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009620 response to fungus IEP Predict GO terms from Neighborhoods
BP GO:0010033 response to organic substance IEP Predict GO terms from Neighborhoods
BP GO:0043207 response to external biotic stimulus IEP Predict GO terms from Neighborhoods
MF GO:0043531 ADP binding IEP Predict GO terms from Neighborhoods
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Predict GO terms from Neighborhoods
BP GO:0050832 defense response to fungus IEP Predict GO terms from Neighborhoods
BP GO:0051707 response to other organism IEP Predict GO terms from Neighborhoods
BP GO:0098542 defense response to other organism IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002182 NB-ARC 2 72
IPR027417 P-loop_NTPase 2 101
No external refs found!