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  5. SOLTUB.AGRIA.G00000014113

SOLTUB.AGRIA.G00000014113


Description : Regulator of chromosome condensation (RCC1) family protein


Gene families : OG_02_0023148 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000014113
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_46


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
BP GO:0006807 nitrogen compound metabolic process IEA AHRD
CC GO:0016020 membrane IEA AHRD
MF GO:0016740 transferase activity IEA AHRD
CC GO:0031981 nuclear lumen IEA AHRD
BP GO:0032502 developmental process IEA AHRD
CC GO:0043232 intracellular non-membrane-bounded organelle IEA AHRD
BP GO:0044238 primary metabolic process IEA AHRD
BP GO:0044260 cellular macromolecule metabolic process IEA AHRD
BP GO:0065007 biological regulation IEA AHRD
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP Predict GO terms from Neighborhoods
CC GO:0005794 Golgi apparatus IEP Predict GO terms from Neighborhoods
CC GO:0005834 heterotrimeric G-protein complex IEP Predict GO terms from Neighborhoods
BP GO:0006497 protein lipidation IEP Predict GO terms from Neighborhoods
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009845 seed germination IEP Predict GO terms from Neighborhoods
BP GO:0009914 hormone transport IEP Predict GO terms from Neighborhoods
BP GO:0009926 auxin polar transport IEP Predict GO terms from Neighborhoods
BP GO:0010540 basipetal auxin transport IEP Predict GO terms from Neighborhoods
BP GO:0010541 acropetal auxin transport IEP Predict GO terms from Neighborhoods
BP GO:0010817 regulation of hormone levels IEP Predict GO terms from Neighborhoods
BP GO:0018342 protein prenylation IEP Predict GO terms from Neighborhoods
BP GO:0018345 protein palmitoylation IEP Predict GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0043543 protein acylation IEP Predict GO terms from Neighborhoods
BP GO:0048364 root development IEP Predict GO terms from Neighborhoods
BP GO:0048527 lateral root development IEP Predict GO terms from Neighborhoods
BP GO:0048528 post-embryonic root development IEP Predict GO terms from Neighborhoods
BP GO:0050832 defense response to fungus IEP Predict GO terms from Neighborhoods
BP GO:0060918 auxin transport IEP Predict GO terms from Neighborhoods
BP GO:0090696 post-embryonic plant organ development IEP Predict GO terms from Neighborhoods
BP GO:0097354 prenylation IEP Predict GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Predict GO terms from Neighborhoods
CC GO:0098797 plasma membrane protein complex IEP Predict GO terms from Neighborhoods
CC GO:1905360 GTPase complex IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 81 133
IPR009091 RCC1/BLIP-II 69 163
No external refs found!