SOLTUB.AGRIA.G00000001426


Description : RING/U-box superfamily protein, putative


Gene families : OG_02_0005305 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000001426
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_197


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA AHRD
CC GO:0005618 cell wall IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005829 cytosol IEA AHRD
MF GO:0008270 zinc ion binding IEA AHRD
BP GO:0009651 response to salt stress IEA AHRD
BP GO:0009737 response to abscisic acid IEA AHRD
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEA AHRD
BP GO:0010200 response to chitin IEA AHRD
BP GO:0030104 water homeostasis IEA AHRD
BP GO:0042059 negative regulation of epidermal growth factor receptor signaling pathway IEA AHRD
BP GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA AHRD
BP GO:0047484 regulation of response to osmotic stress IEA AHRD
BP GO:0051865 protein autoubiquitination IEA AHRD
MF GO:0061630 ubiquitin protein ligase activity IEA AHRD
BP GO:0070534 protein K63-linked ubiquitination IEA AHRD
BP GO:0070936 protein K48-linked ubiquitination IEA AHRD
BP GO:0090378 seed trichome elongation IEA AHRD
BP GO:1902006 negative regulation of proline biosynthetic process IEA AHRD
BP GO:2000070 regulation of response to water deprivation IEA AHRD
BP GO:2000637 positive regulation of miRNA-mediated gene silencing IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Predict GO terms from Neighborhoods
BP GO:0000291 nuclear-transcribed mRNA catabolic process, exonucleolytic IEP Predict GO terms from Neighborhoods
CC GO:0000932 P-body IEP Predict GO terms from Neighborhoods
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0001046 core promoter sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0002119 nematode larval development IEP Predict GO terms from Neighborhoods
BP GO:0002164 larval development IEP Predict GO terms from Neighborhoods
MF GO:0004180 carboxypeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004181 metallocarboxypeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004457 lactate dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0004459 L-lactate dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004532 exoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004534 5'-3' exoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004540 ribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0006006 glucose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006007 glucose catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006089 lactate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006090 pyruvate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006096 glycolytic process IEP Predict GO terms from Neighborhoods
BP GO:0006113 fermentation IEP Predict GO terms from Neighborhoods
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0006734 NADH metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006757 ATP generation from ADP IEP Predict GO terms from Neighborhoods
BP GO:0006986 response to unfolded protein IEP Predict GO terms from Neighborhoods
MF GO:0008235 metalloexopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008237 metallopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008238 exopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0008334 histone mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0008340 determination of adult lifespan IEP Predict GO terms from Neighborhoods
MF GO:0008409 5'-3' exonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0009132 nucleoside diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010014 meristem initiation IEP Predict GO terms from Neighborhoods
BP GO:0010072 primary shoot apical meristem specification IEP Predict GO terms from Neighborhoods
BP GO:0010167 response to nitrate IEP Predict GO terms from Neighborhoods
BP GO:0016441 post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
CC GO:0016442 RISC complex IEP Predict GO terms from Neighborhoods
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
BP GO:0019048 modulation by virus of host process IEP Predict GO terms from Neighborhoods
BP GO:0019244 lactate biosynthetic process from pyruvate IEP Predict GO terms from Neighborhoods
BP GO:0019249 lactate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019320 hexose catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019659 glucose catabolic process to lactate IEP Predict GO terms from Neighborhoods
BP GO:0019660 glycolytic fermentation IEP Predict GO terms from Neighborhoods
BP GO:0019661 glucose catabolic process to lactate via pyruvate IEP Predict GO terms from Neighborhoods
MF GO:0030145 manganese ion binding IEP Predict GO terms from Neighborhoods
BP GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA IEP Predict GO terms from Neighborhoods
CC GO:0031332 RNAi effector complex IEP Predict GO terms from Neighborhoods
BP GO:0032204 regulation of telomere maintenance IEP Predict GO terms from Neighborhoods
BP GO:0032205 negative regulation of telomere maintenance IEP Predict GO terms from Neighborhoods
BP GO:0032210 regulation of telomere maintenance via telomerase IEP Predict GO terms from Neighborhoods
BP GO:0032211 negative regulation of telomere maintenance via telomerase IEP Predict GO terms from Neighborhoods
CC GO:0035686 sperm fibrous sheath IEP Predict GO terms from Neighborhoods
BP GO:0035821 modulation of process of another organism IEP Predict GO terms from Neighborhoods
BP GO:0035966 response to topologically incorrect protein IEP Predict GO terms from Neighborhoods
BP GO:0042126 nitrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042128 nitrate assimilation IEP Predict GO terms from Neighborhoods
CC GO:0043186 P granule IEP Predict GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043627 response to estrogen IEP Predict GO terms from Neighborhoods
BP GO:0044003 modulation by symbiont of host process IEP Predict GO terms from Neighborhoods
BP GO:0046031 ADP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046034 ATP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046365 monosaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046683 response to organophosphorus IEP Predict GO terms from Neighborhoods
BP GO:0046939 nucleotide phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0048569 post-embryonic animal organ development IEP Predict GO terms from Neighborhoods
MF GO:0050072 m7G(5')pppN diphosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0051053 negative regulation of DNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0051287 NAD binding IEP Predict GO terms from Neighborhoods
BP GO:0051591 response to cAMP IEP Predict GO terms from Neighborhoods
BP GO:0051701 biological process involved in interaction with host IEP Predict GO terms from Neighborhoods
BP GO:0060260 regulation of transcription initiation by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0060261 positive regulation of transcription initiation by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0071044 histone mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0071941 nitrogen cycle metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090421 embryonic meristem initiation IEP Predict GO terms from Neighborhoods
BP GO:0110154 RNA decapping IEP Predict GO terms from Neighborhoods
BP GO:0110156 methylguanosine-cap decapping IEP Predict GO terms from Neighborhoods
BP GO:1904356 regulation of telomere maintenance via telomere lengthening IEP Predict GO terms from Neighborhoods
BP GO:1904357 negative regulation of telomere maintenance via telomere lengthening IEP Predict GO terms from Neighborhoods
BP GO:1904872 regulation of telomerase RNA localization to Cajal body IEP Predict GO terms from Neighborhoods
BP GO:2000142 regulation of DNA-templated transcription initiation IEP Predict GO terms from Neighborhoods
BP GO:2000144 positive regulation of DNA-templated transcription initiation IEP Predict GO terms from Neighborhoods
BP GO:2000278 regulation of DNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000279 negative regulation of DNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2001057 reactive nitrogen species metabolic process IEP Predict GO terms from Neighborhoods
BP GO:2001251 negative regulation of chromosome organization IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001841 Znf_RING 129 171
No external refs found!