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Description : RING/U-box superfamily protein, putative
Gene families : OG_02_0005305 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000001426 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_197 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000209 | protein polyubiquitination | None | Extended |
| BP | GO:0000820 | regulation of glutamine family amino acid metabolic process | None | Extended |
| BP | GO:0000902 | cell morphogenesis | None | Extended |
| BP | GO:0000904 | cell morphogenesis involved in differentiation | None | Extended |
| BP | GO:0003006 | developmental process involved in reproduction | None | Extended |
| MF | GO:0003674 | molecular_function | None | Extended |
| MF | GO:0003824 | catalytic activity | None | Extended |
| MF | GO:0004842 | ubiquitin-protein transferase activity | None | Extended |
| MF | GO:0005488 | binding | None | Extended |
| MF | GO:0005515 | protein binding | IEA | AHRD |
| CC | GO:0005575 | cellular_component | None | Extended |
| CC | GO:0005618 | cell wall | IEA | AHRD |
| CC | GO:0005634 | nucleus | IEA | AHRD |
| CC | GO:0005829 | cytosol | IEA | AHRD |
| BP | GO:0006508 | proteolysis | None | Extended |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | None | Extended |
| BP | GO:0006521 | regulation of cellular amino acid metabolic process | None | Extended |
| BP | GO:0006807 | nitrogen compound metabolic process | None | Extended |
| BP | GO:0006950 | response to stress | None | Extended |
| BP | GO:0006970 | response to osmotic stress | None | Extended |
| BP | GO:0008150 | biological_process | None | Extended |
| BP | GO:0008152 | metabolic process | None | Extended |
| MF | GO:0008270 | zinc ion binding | IEA | AHRD |
| BP | GO:0009056 | catabolic process | None | Extended |
| BP | GO:0009057 | macromolecule catabolic process | None | Extended |
| BP | GO:0009628 | response to abiotic stimulus | None | Extended |
| BP | GO:0009651 | response to salt stress | IEA | AHRD |
| BP | GO:0009653 | anatomical structure morphogenesis | None | Extended |
| BP | GO:0009719 | response to endogenous stimulus | None | Extended |
| BP | GO:0009725 | response to hormone | None | Extended |
| BP | GO:0009737 | response to abscisic acid | IEA | AHRD |
| BP | GO:0009826 | unidimensional cell growth | None | Extended |
| BP | GO:0009889 | regulation of biosynthetic process | None | Extended |
| BP | GO:0009890 | negative regulation of biosynthetic process | None | Extended |
| BP | GO:0009892 | negative regulation of metabolic process | None | Extended |
| BP | GO:0009937 | regulation of gibberellic acid mediated signaling pathway | None | Extended |
| BP | GO:0009938 | negative regulation of gibberellic acid mediated signaling pathway | IEA | AHRD |
| BP | GO:0009966 | regulation of signal transduction | None | Extended |
| BP | GO:0009968 | negative regulation of signal transduction | None | Extended |
| BP | GO:0009987 | cellular process | None | Extended |
| BP | GO:0010033 | response to organic substance | None | Extended |
| BP | GO:0010200 | response to chitin | IEA | AHRD |
| BP | GO:0010243 | response to organonitrogen compound | None | Extended |
| BP | GO:0010468 | regulation of gene expression | None | Extended |
| BP | GO:0010565 | regulation of cellular ketone metabolic process | None | Extended |
| BP | GO:0010646 | regulation of cell communication | None | Extended |
| BP | GO:0010648 | negative regulation of cell communication | None | Extended |
| BP | GO:0016049 | cell growth | None | Extended |
| BP | GO:0016567 | protein ubiquitination | None | Extended |
| MF | GO:0016740 | transferase activity | None | Extended |
| BP | GO:0019222 | regulation of metabolic process | None | Extended |
| BP | GO:0019538 | protein metabolic process | None | Extended |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | None | Extended |
| BP | GO:0019941 | modification-dependent protein catabolic process | None | Extended |
| BP | GO:0022412 | cellular process involved in reproduction in multicellular organism | None | Extended |
| BP | GO:0022414 | reproductive process | None | Extended |
| BP | GO:0023051 | regulation of signaling | None | Extended |
| BP | GO:0023057 | negative regulation of signaling | None | Extended |
| BP | GO:0030104 | water homeostasis | IEA | AHRD |
| CC | GO:0030312 | external encapsulating structure | None | Extended |
| BP | GO:0031323 | regulation of cellular metabolic process | None | Extended |
| BP | GO:0031324 | negative regulation of cellular metabolic process | None | Extended |
| BP | GO:0031326 | regulation of cellular biosynthetic process | None | Extended |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | None | Extended |
| BP | GO:0032446 | protein modification by small protein conjugation | None | Extended |
| BP | GO:0032502 | developmental process | None | Extended |
| BP | GO:0033238 | regulation of cellular amine metabolic process | None | Extended |
| BP | GO:0033239 | negative regulation of cellular amine metabolic process | None | Extended |
| BP | GO:0033993 | response to lipid | None | Extended |
| BP | GO:0036211 | protein modification process | None | Extended |
| BP | GO:0040007 | growth | None | Extended |
| BP | GO:0042058 | regulation of epidermal growth factor receptor signaling pathway | None | Extended |
| BP | GO:0042059 | negative regulation of epidermal growth factor receptor signaling pathway | IEA | AHRD |
| BP | GO:0042221 | response to chemical | None | Extended |
| BP | GO:0042592 | homeostatic process | None | Extended |
| BP | GO:0043162 | ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway | IEA | AHRD |
| MF | GO:0043167 | ion binding | None | Extended |
| MF | GO:0043169 | cation binding | None | Extended |
| BP | GO:0043170 | macromolecule metabolic process | None | Extended |
| CC | GO:0043226 | organelle | None | Extended |
| CC | GO:0043227 | membrane-bounded organelle | None | Extended |
| CC | GO:0043229 | intracellular organelle | None | Extended |
| CC | GO:0043231 | intracellular membrane-bounded organelle | None | Extended |
| BP | GO:0043412 | macromolecule modification | None | Extended |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | None | Extended |
| BP | GO:0044237 | cellular metabolic process | None | Extended |
| BP | GO:0044238 | primary metabolic process | None | Extended |
| BP | GO:0044248 | cellular catabolic process | None | Extended |
| BP | GO:0044260 | cellular macromolecule metabolic process | None | Extended |
| BP | GO:0044265 | cellular macromolecule catabolic process | None | Extended |
| BP | GO:0045763 | negative regulation of cellular amino acid metabolic process | None | Extended |
| MF | GO:0046872 | metal ion binding | None | Extended |
| MF | GO:0046914 | transition metal ion binding | None | Extended |
| BP | GO:0047484 | regulation of response to osmotic stress | IEA | AHRD |
| BP | GO:0048518 | positive regulation of biological process | None | Extended |
| BP | GO:0048519 | negative regulation of biological process | None | Extended |
| BP | GO:0048523 | negative regulation of cellular process | None | Extended |
| BP | GO:0048583 | regulation of response to stimulus | None | Extended |
| BP | GO:0048585 | negative regulation of response to stimulus | None | Extended |
| BP | GO:0048589 | developmental growth | None | Extended |
| BP | GO:0048878 | chemical homeostasis | None | Extended |
| BP | GO:0050789 | regulation of biological process | None | Extended |
| BP | GO:0050794 | regulation of cellular process | None | Extended |
| BP | GO:0050896 | response to stimulus | None | Extended |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | None | Extended |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | None | Extended |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | None | Extended |
| BP | GO:0051865 | protein autoubiquitination | IEA | AHRD |
| BP | GO:0060147 | regulation of post-transcriptional gene silencing | None | Extended |
| BP | GO:0060148 | positive regulation of post-transcriptional gene silencing | None | Extended |
| BP | GO:0060255 | regulation of macromolecule metabolic process | None | Extended |
| BP | GO:0060560 | developmental growth involved in morphogenesis | None | Extended |
| BP | GO:0060964 | regulation of miRNA-mediated gene silencing | None | Extended |
| BP | GO:0060966 | regulation of gene silencing by RNA | None | Extended |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEA | AHRD |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | None | Extended |
| BP | GO:0062012 | regulation of small molecule metabolic process | None | Extended |
| BP | GO:0062014 | negative regulation of small molecule metabolic process | None | Extended |
| BP | GO:0065007 | biological regulation | None | Extended |
| BP | GO:0065008 | regulation of biological quality | None | Extended |
| BP | GO:0070534 | protein K63-linked ubiquitination | IEA | AHRD |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | None | Extended |
| BP | GO:0070936 | protein K48-linked ubiquitination | IEA | AHRD |
| BP | GO:0071704 | organic substance metabolic process | None | Extended |
| BP | GO:0080090 | regulation of primary metabolic process | None | Extended |
| BP | GO:0080134 | regulation of response to stress | None | Extended |
| BP | GO:0090378 | seed trichome elongation | IEA | AHRD |
| BP | GO:0097305 | response to alcohol | None | Extended |
| CC | GO:0110165 | cellular anatomical entity | None | Extended |
| MF | GO:0140096 | catalytic activity, acting on a protein | None | Extended |
| BP | GO:1900368 | regulation of post-transcriptional gene silencing by RNA | None | Extended |
| BP | GO:1900370 | positive regulation of post-transcriptional gene silencing by RNA | None | Extended |
| BP | GO:1901184 | regulation of ERBB signaling pathway | None | Extended |
| BP | GO:1901185 | negative regulation of ERBB signaling pathway | None | Extended |
| BP | GO:1901564 | organonitrogen compound metabolic process | None | Extended |
| BP | GO:1901575 | organic substance catabolic process | None | Extended |
| BP | GO:1901698 | response to nitrogen compound | None | Extended |
| BP | GO:1901700 | response to oxygen-containing compound | None | Extended |
| BP | GO:1902005 | regulation of proline biosynthetic process | None | Extended |
| BP | GO:1902006 | negative regulation of proline biosynthetic process | IEA | AHRD |
| BP | GO:2000070 | regulation of response to water deprivation | IEA | AHRD |
| BP | GO:2000214 | regulation of proline metabolic process | None | Extended |
| BP | GO:2000215 | negative regulation of proline metabolic process | None | Extended |
| BP | GO:2000282 | regulation of cellular amino acid biosynthetic process | None | Extended |
| BP | GO:2000283 | negative regulation of cellular amino acid biosynthetic process | None | Extended |
| BP | GO:2000637 | positive regulation of miRNA-mediated gene silencing | IEA | AHRD |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000291 | nuclear-transcribed mRNA catabolic process, exonucleolytic | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000932 | P-body | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001046 | core promoter sequence-specific DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002119 | nematode larval development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002164 | larval development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004180 | carboxypeptidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004181 | metallocarboxypeptidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004457 | lactate dehydrogenase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004459 | L-lactate dehydrogenase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004527 | exonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004532 | exoribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004534 | 5'-3' exoribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004540 | ribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006006 | glucose metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006007 | glucose catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006082 | organic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006089 | lactate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006090 | pyruvate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006096 | glycolytic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006113 | fermentation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006734 | NADH metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006757 | ATP generation from ADP | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006986 | response to unfolded protein | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008235 | metalloexopeptidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008237 | metallopeptidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008238 | exopeptidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008334 | histone mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008340 | determination of adult lifespan | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008409 | 5'-3' exonuclease activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010014 | meristem initiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010072 | primary shoot apical meristem specification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010167 | response to nitrate | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016441 | post-transcriptional gene silencing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016442 | RISC complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016796 | exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016896 | exoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019048 | modulation by virus of host process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019244 | lactate biosynthetic process from pyruvate | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019249 | lactate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019320 | hexose catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019659 | glucose catabolic process to lactate | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019660 | glycolytic fermentation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019661 | glucose catabolic process to lactate via pyruvate | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030145 | manganese ion binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031087 | deadenylation-independent decapping of nuclear-transcribed mRNA | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031332 | RNAi effector complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032204 | regulation of telomere maintenance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032205 | negative regulation of telomere maintenance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032210 | regulation of telomere maintenance via telomerase | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032211 | negative regulation of telomere maintenance via telomerase | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0035686 | sperm fibrous sheath | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035821 | modulation of process of another organism | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035966 | response to topologically incorrect protein | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042126 | nitrate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042128 | nitrate assimilation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043186 | P granule | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043627 | response to estrogen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044003 | modulation by symbiont of host process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046031 | ADP metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046034 | ATP metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046365 | monosaccharide catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046683 | response to organophosphorus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048569 | post-embryonic animal organ development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0050072 | m7G(5')pppN diphosphatase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051053 | negative regulation of DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051287 | NAD binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051591 | response to cAMP | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051701 | biological process involved in interaction with host | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060260 | regulation of transcription initiation by RNA polymerase II | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060261 | positive regulation of transcription initiation by RNA polymerase II | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071044 | histone mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071941 | nitrogen cycle metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090421 | embryonic meristem initiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0110154 | RNA decapping | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0110156 | methylguanosine-cap decapping | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904356 | regulation of telomere maintenance via telomere lengthening | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904357 | negative regulation of telomere maintenance via telomere lengthening | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904872 | regulation of telomerase RNA localization to Cajal body | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000142 | regulation of DNA-templated transcription initiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000144 | positive regulation of DNA-templated transcription initiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000278 | regulation of DNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000279 | negative regulation of DNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001057 | reactive nitrogen species metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001251 | negative regulation of chromosome organization | IEP | Predict GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 129 | 171 |
| No external refs found! |
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