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  5. SOLTUB.AGRIA.G00000014367

SOLTUB.AGRIA.G00000014367


Description : Mlp-like protein 34


Gene families : OG_02_0000666 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000014367
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_9


Type GO Term Name Evidence Source
BP GO:0002253 activation of immune response IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
CC GO:0043231 intracellular membrane-bounded organelle IEA AHRD
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Type GO Term Name Evidence Source
MF GO:0000175 3'-5'-exoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0000287 magnesium ion binding IEP Predict GO terms from Neighborhoods
BP GO:0000724 double-strand break repair via homologous recombination IEP Predict GO terms from Neighborhoods
BP GO:0000725 recombinational repair IEP Predict GO terms from Neighborhoods
BP GO:0000729 DNA double-strand break processing IEP Predict GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004529 exodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004532 exoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004536 deoxyribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004540 ribonuclease activity IEP Predict GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Predict GO terms from Neighborhoods
CC GO:0005741 mitochondrial outer membrane IEP Predict GO terms from Neighborhoods
CC GO:0005759 mitochondrial matrix IEP Predict GO terms from Neighborhoods
CC GO:0005856 cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Predict GO terms from Neighborhoods
BP GO:0006302 double-strand break repair IEP Predict GO terms from Neighborhoods
BP GO:0006310 DNA recombination IEP Predict GO terms from Neighborhoods
BP GO:0006974 cellular response to DNA damage stimulus IEP Predict GO terms from Neighborhoods
MF GO:0008296 3'-5'-exodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0008310 single-stranded DNA 3'-5' exodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0008408 3'-5' exonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0008852 exodeoxyribonuclease I activity IEP Predict GO terms from Neighborhoods
MF GO:0008859 exoribonuclease II activity IEP Predict GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Predict GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predict GO terms from Neighborhoods
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Predict GO terms from Neighborhoods
MF GO:0030145 manganese ion binding IEP Predict GO terms from Neighborhoods
BP GO:0031047 gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0031297 replication fork processing IEP Predict GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Predict GO terms from Neighborhoods
CC GO:0031968 organelle outer membrane IEP Predict GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Predict GO terms from Neighborhoods
MF GO:0042803 protein homodimerization activity IEP Predict GO terms from Neighborhoods
MF GO:0043021 ribonucleoprotein complex binding IEP Predict GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Predict GO terms from Neighborhoods
MF GO:0043621 protein self-association IEP Predict GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Predict GO terms from Neighborhoods
BP GO:0045005 DNA-templated DNA replication maintenance of fidelity IEP Predict GO terms from Neighborhoods
CC GO:0045111 intermediate filament cytoskeleton IEP Predict GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Predict GO terms from Neighborhoods
MF GO:0046983 protein dimerization activity IEP Predict GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Predict GO terms from Neighborhoods
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic IEP Predict GO terms from Neighborhoods
CC GO:0090734 site of DNA damage IEP Predict GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Predict GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Predict GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Predict GO terms from Neighborhoods
MF GO:1905172 RISC complex binding IEP Predict GO terms from Neighborhoods
BP GO:2000628 regulation of miRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000630 positive regulation of miRNA metabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000916 Bet_v_I/MLP 4 147
No external refs found!