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  5. SOLTUB.AGRIA.G00000014716

SOLTUB.AGRIA.G00000014716


Description : TdcA1-ORF1-ORF2 protein


Gene families : OG_02_0001171 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000014716
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_558

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000005805 No alias PttA' 1.0 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000018691 No alias Unknown protein 0.5 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000018941 No alias TdcA1-ORF1-ORF2 protein 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000027437 No alias TdcA1-ORF1-ORF2 protein 0.5 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000030946 No alias F15O4.28 0.17 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000005805 No alias PttA' 1.0 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000018691 No alias Unknown protein 0.5 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000018941 No alias TdcA1-ORF1-ORF2 protein 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000027437 No alias TdcA1-ORF1-ORF2 protein 0.5 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000030946 No alias F15O4.28 0.17 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000005805 No alias PttA' 1.0 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000018691 No alias Unknown protein 0.5 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000018941 No alias TdcA1-ORF1-ORF2 protein 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000027437 No alias TdcA1-ORF1-ORF2 protein 0.5 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000030946 No alias F15O4.28 0.17 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004252 Probable_transposase_24 152 284
No external refs found!