SOLTUB.AGRIA.G00000014724


Description : AP2/B3-like transcriptional factor family protein


Gene families : OG_02_0028921 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000014724
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_139


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
MF GO:0043565 sequence-specific DNA binding IEA AHRD
BP GO:2000028 regulation of photoperiodism, flowering IEA AHRD
Type GO Term Name Evidence Source
CC GO:0000419 RNA polymerase V complex IEP Predict GO terms from Neighborhoods
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predict GO terms from Neighborhoods
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Predict GO terms from Neighborhoods
BP GO:0009608 response to symbiont IEP Predict GO terms from Neighborhoods
BP GO:0009610 response to symbiotic fungus IEP Predict GO terms from Neighborhoods
BP GO:0009856 pollination IEP Predict GO terms from Neighborhoods
BP GO:0015858 nucleoside transport IEP Predict GO terms from Neighborhoods
CC GO:0030880 RNA polymerase complex IEP Predict GO terms from Neighborhoods
CC GO:0031225 anchored component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0044030 regulation of DNA methylation IEP Predict GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Predict GO terms from Neighborhoods
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predict GO terms from Neighborhoods
BP GO:1901642 nucleoside transmembrane transport IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 2 51
IPR003340 B3_DNA-bd 217 291
IPR015300 DNA-bd_pseudobarrel_sf 2 54
IPR015300 DNA-bd_pseudobarrel_sf 196 297
No external refs found!