SOLTUB.AGRIA.G00000015478


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_02_0014275 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000015478
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_41


Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0010200 response to chitin IEA AHRD
BP GO:0031348 negative regulation of defense response IEA AHRD
BP GO:0031648 protein destabilization IEA AHRD
BP GO:0042742 defense response to bacterium IEA AHRD
BP GO:0043066 negative regulation of apoptotic process IEA AHRD
MF GO:0043621 protein self-association IEA AHRD
BP GO:0048586 regulation of long-day photoperiodism, flowering IEA AHRD
BP GO:0050777 negative regulation of immune response IEA AHRD
BP GO:0051865 protein autoubiquitination IEA AHRD
MF GO:0061630 ubiquitin protein ligase activity IEA AHRD
MF GO:0070696 transmembrane receptor protein serine/threonine kinase binding IEA AHRD
BP GO:2000022 regulation of jasmonic acid mediated signaling pathway IEA AHRD
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predict GO terms from Neighborhoods
BP GO:0001101 response to acid chemical IEP Predict GO terms from Neighborhoods
BP GO:0001523 retinoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0001763 morphogenesis of a branching structure IEP Predict GO terms from Neighborhoods
BP GO:0001845 phagolysosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0002220 innate immune response activating cell surface receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0002229 defense response to oomycetes IEP Predict GO terms from Neighborhoods
BP GO:0002429 immune response-activating cell surface receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0002752 cell surface pattern recognition receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0002768 immune response-regulating cell surface receptor signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0004022 alcohol dehydrogenase (NAD+) activity IEP Predict GO terms from Neighborhoods
MF GO:0004555 alpha,alpha-trehalase activity IEP Predict GO terms from Neighborhoods
MF GO:0004723 calcium-dependent protein serine/threonine phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005216 ion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005253 anion channel activity IEP Predict GO terms from Neighborhoods
BP GO:0005513 detection of calcium ion IEP Predict GO terms from Neighborhoods
CC GO:0005767 secondary lysosome IEP Predict GO terms from Neighborhoods
CC GO:0005886 plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0005955 calcineurin complex IEP Predict GO terms from Neighborhoods
BP GO:0005991 trehalose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005993 trehalose catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006629 lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006714 sesquiterpenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006720 isoprenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006721 terpenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006811 ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006813 potassium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006821 chloride transport IEP Predict GO terms from Neighborhoods
BP GO:0006970 response to osmotic stress IEP Predict GO terms from Neighborhoods
BP GO:0007260 tyrosine phosphorylation of STAT protein IEP Predict GO terms from Neighborhoods
MF GO:0008061 chitin binding IEP Predict GO terms from Neighborhoods
BP GO:0008299 isoprenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0008300 isoprenoid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0008308 voltage-gated anion channel activity IEP Predict GO terms from Neighborhoods
BP GO:0008610 lipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009270 response to humidity IEP Predict GO terms from Neighborhoods
BP GO:0009313 oligosaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009414 response to water deprivation IEP Predict GO terms from Neighborhoods
BP GO:0009415 response to water IEP Predict GO terms from Neighborhoods
BP GO:0009593 detection of chemical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009628 response to abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009651 response to salt stress IEP Predict GO terms from Neighborhoods
MF GO:0009674 potassium:sodium symporter activity IEP Predict GO terms from Neighborhoods
BP GO:0009698 phenylpropanoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009699 phenylpropanoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009717 isoflavonoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009719 response to endogenous stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009725 response to hormone IEP Predict GO terms from Neighborhoods
BP GO:0009733 response to auxin IEP Predict GO terms from Neighborhoods
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009789 positive regulation of abscisic acid-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009806 lignan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009807 lignan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009808 lignin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009809 lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009812 flavonoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009813 flavonoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009830 cell wall modification involved in abscission IEP Predict GO terms from Neighborhoods
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP Predict GO terms from Neighborhoods
BP GO:0009958 positive gravitropism IEP Predict GO terms from Neighborhoods
BP GO:0009965 leaf morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010035 response to inorganic substance IEP Predict GO terms from Neighborhoods
BP GO:0010037 response to carbon dioxide IEP Predict GO terms from Neighborhoods
BP GO:0010094 specification of carpel identity IEP Predict GO terms from Neighborhoods
BP GO:0010097 specification of stamen identity IEP Predict GO terms from Neighborhoods
BP GO:0010119 regulation of stomatal movement IEP Predict GO terms from Neighborhoods
BP GO:0010158 abaxial cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010193 response to ozone IEP Predict GO terms from Neighborhoods
BP GO:0010223 secondary shoot formation IEP Predict GO terms from Neighborhoods
BP GO:0010346 shoot axis formation IEP Predict GO terms from Neighborhoods
MF GO:0010436 carotenoid dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0010446 response to alkaline pH IEP Predict GO terms from Neighborhoods
BP GO:0010683 tricyclic triterpenoid metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0012510 trans-Golgi network transport vesicle membrane IEP Predict GO terms from Neighborhoods
MF GO:0015075 ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015267 channel activity IEP Predict GO terms from Neighborhoods
MF GO:0015370 solute:sodium symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015665 alcohol transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015692 lead ion transport IEP Predict GO terms from Neighborhoods
BP GO:0015711 organic anion transport IEP Predict GO terms from Neighborhoods
BP GO:0015718 monocarboxylic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015850 organic hydroxy compound transport IEP Predict GO terms from Neighborhoods
MF GO:0015927 trehalase activity IEP Predict GO terms from Neighborhoods
BP GO:0016106 sesquiterpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016110 tetraterpenoid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016114 terpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016118 carotenoid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016119 carotene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016121 carotene catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016122 xanthophyll metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016124 xanthophyll catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016145 S-glycoside catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predict GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Predict GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0018958 phenol-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019748 secondary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019759 glycosinolate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019762 glucosinolate catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0022803 passive transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0030001 metal ion transport IEP Predict GO terms from Neighborhoods
MF GO:0030744 luteolin O-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0030755 quercetin 3-O-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0031156 regulation of sorocarp development IEP Predict GO terms from Neighborhoods
CC GO:0032010 phagolysosome IEP Predict GO terms from Neighborhoods
BP GO:0032491 detection of molecule of fungal origin IEP Predict GO terms from Neighborhoods
BP GO:0032494 response to peptidoglycan IEP Predict GO terms from Neighborhoods
BP GO:0032499 detection of peptidoglycan IEP Predict GO terms from Neighborhoods
BP GO:0032502 developmental process IEP Predict GO terms from Neighborhoods
BP GO:0032780 negative regulation of ATP-dependent activity IEP Predict GO terms from Neighborhoods
BP GO:0033510 luteolin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033511 luteolin biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0033770 2-hydroxyisoflavanone synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0033799 myricetin 3'-O-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0042214 terpene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042307 positive regulation of protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0042344 indole glucosinolate catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0042349 guiding stereospecific synthesis activity IEP Predict GO terms from Neighborhoods
BP GO:0042436 indole-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042440 pigment metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042539 hypotonic salinity response IEP Predict GO terms from Neighborhoods
BP GO:0043010 camera-type eye development IEP Predict GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044255 cellular lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044277 cell wall disassembly IEP Predict GO terms from Neighborhoods
BP GO:0044550 secondary metabolite biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045472 response to ether IEP Predict GO terms from Neighborhoods
MF GO:0045549 9-cis-epoxycarotenoid dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0046148 pigment biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046189 phenol-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046247 terpene catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046287 isoflavonoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046352 disaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046864 isoprenoid transport IEP Predict GO terms from Neighborhoods
BP GO:0046865 terpenoid transport IEP Predict GO terms from Neighborhoods
MF GO:0047763 caffeate O-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048759 xylem vessel member cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0050891 multicellular organismal water homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0051552 flavone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051553 flavone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0051554 flavonol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051555 flavonol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0051972 regulation of telomerase activity IEP Predict GO terms from Neighborhoods
BP GO:0051973 positive regulation of telomerase activity IEP Predict GO terms from Neighborhoods
BP GO:0060178 regulation of exocyst localization IEP Predict GO terms from Neighborhoods
BP GO:0060416 response to growth hormone IEP Predict GO terms from Neighborhoods
BP GO:0071805 potassium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0080003 thalianol metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0080004 thalian-diol desaturase activity IEP Predict GO terms from Neighborhoods
BP GO:0080168 abscisic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0090059 protoxylem development IEP Predict GO terms from Neighborhoods
BP GO:0090333 regulation of stomatal closure IEP Predict GO terms from Neighborhoods
MF GO:0090440 abscisic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0097150 neuronal stem cell population maintenance IEP Predict GO terms from Neighborhoods
BP GO:0098657 import into cell IEP Predict GO terms from Neighborhoods
BP GO:0098739 import across plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:0102251 all-trans-beta-apo-10'-carotenal cleavage oxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0102395 9-cis-beta-carotene 9',10'-cleavage oxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0102396 9-cis-10'-apo-beta-carotenal cleavage oxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0102910 dirigent protein activity IEP Predict GO terms from Neighborhoods
BP GO:0120251 hydrocarbon biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0120252 hydrocarbon metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0120253 hydrocarbon catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1900424 regulation of defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:1900426 positive regulation of defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:1901334 lactone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901336 lactone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901419 regulation of response to alcohol IEP Predict GO terms from Neighborhoods
BP GO:1901503 ether biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901529 positive regulation of anion channel activity IEP Predict GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901598 (-)-pinoresinol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901599 (-)-pinoresinol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901600 strigolactone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901601 strigolactone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901615 organic hydroxy compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903013 response to differentiation-inducing factor 1 IEP Predict GO terms from Neighborhoods
BP GO:1903338 regulation of cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:1903793 positive regulation of anion transport IEP Predict GO terms from Neighborhoods
BP GO:1903961 positive regulation of anion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1904892 regulation of receptor signaling pathway via STAT IEP Predict GO terms from Neighborhoods
BP GO:1904894 positive regulation of receptor signaling pathway via STAT IEP Predict GO terms from Neighborhoods
BP GO:1905393 plant organ formation IEP Predict GO terms from Neighborhoods
BP GO:1905957 regulation of cellular response to alcohol IEP Predict GO terms from Neighborhoods
BP GO:2000035 regulation of stem cell division IEP Predict GO terms from Neighborhoods
BP GO:2000652 regulation of secondary cell wall biogenesis IEP Predict GO terms from Neighborhoods
MF GO:2001080 chitosan binding IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003613 Ubox_domain 506 576
IPR016024 ARM-type_fold 651 1161
IPR001680 WD40_repeat 1453 1481
IPR001680 WD40_repeat 1236 1271
IPR036322 WD40_repeat_dom_sf 1213 1484
No external refs found!