SOLTUB.AGRIA.G00000016561


Description : B3 domain-containing protein


Gene families : OG_02_0005982 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000016561
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_72


Type GO Term Name Evidence Source
CC GO:0043231 intracellular membrane-bounded organelle IEA AHRD
Type GO Term Name Evidence Source
MF GO:0000175 3'-5'-exoribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0000226 microtubule cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0000280 nuclear division IEP Predict GO terms from Neighborhoods
CC GO:0000923 equatorial microtubule organizing center IEP Predict GO terms from Neighborhoods
CC GO:0000930 gamma-tubulin complex IEP Predict GO terms from Neighborhoods
BP GO:0001649 osteoblast differentiation IEP Predict GO terms from Neighborhoods
BP GO:0001764 neuron migration IEP Predict GO terms from Neighborhoods
BP GO:0001936 regulation of endothelial cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0001938 positive regulation of endothelial cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0002940 tRNA N2-guanine methylation IEP Predict GO terms from Neighborhoods
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004326 tetrahydrofolylpolyglutamate synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0004407 histone deacetylase activity IEP Predict GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004532 exoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004697 protein kinase C activity IEP Predict GO terms from Neighborhoods
MF GO:0004698 calcium-dependent protein kinase C activity IEP Predict GO terms from Neighborhoods
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0005635 nuclear envelope IEP Predict GO terms from Neighborhoods
CC GO:0005637 nuclear inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0005731 nucleolus organizer region IEP Predict GO terms from Neighborhoods
CC GO:0005813 centrosome IEP Predict GO terms from Neighborhoods
CC GO:0005819 spindle IEP Predict GO terms from Neighborhoods
CC GO:0005828 kinetochore microtubule IEP Predict GO terms from Neighborhoods
CC GO:0005874 microtubule IEP Predict GO terms from Neighborhoods
BP GO:0006110 regulation of glycolytic process IEP Predict GO terms from Neighborhoods
BP GO:0006111 regulation of gluconeogenesis IEP Predict GO terms from Neighborhoods
BP GO:0006284 base-excision repair IEP Predict GO terms from Neighborhoods
BP GO:0006356 regulation of transcription by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:0006471 protein ADP-ribosylation IEP Predict GO terms from Neighborhoods
BP GO:0006473 protein acetylation IEP Predict GO terms from Neighborhoods
BP GO:0006475 internal protein amino acid acetylation IEP Predict GO terms from Neighborhoods
BP GO:0006476 protein deacetylation IEP Predict GO terms from Neighborhoods
BP GO:0006607 NLS-bearing protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006760 folic acid-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0007010 cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0007017 microtubule-based process IEP Predict GO terms from Neighborhoods
BP GO:0007051 spindle organization IEP Predict GO terms from Neighborhoods
BP GO:0007072 positive regulation of transcription involved in exit from mitosis IEP Predict GO terms from Neighborhoods
BP GO:0007098 centrosome cycle IEP Predict GO terms from Neighborhoods
BP GO:0007129 homologous chromosome pairing at meiosis IEP Predict GO terms from Neighborhoods
BP GO:0007276 gamete generation IEP Predict GO terms from Neighborhoods
MF GO:0008017 microtubule binding IEP Predict GO terms from Neighborhoods
MF GO:0008139 nuclear localization sequence binding IEP Predict GO terms from Neighborhoods
MF GO:0008146 sulfotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008175 tRNA methyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0008275 gamma-tubulin small complex IEP Predict GO terms from Neighborhoods
MF GO:0008841 dihydrofolate synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009451 RNA modification IEP Predict GO terms from Neighborhoods
MF GO:0009931 calcium-dependent protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0010422 regulation of brassinosteroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010479 stele development IEP Predict GO terms from Neighborhoods
BP GO:0010529 negative regulation of transposition IEP Predict GO terms from Neighborhoods
BP GO:0010586 miRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010587 miRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010638 positive regulation of organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0010677 negative regulation of cellular carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010827 regulation of glucose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0010829 negative regulation of glucose transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0010857 calcium-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0010893 positive regulation of steroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010968 regulation of microtubule nucleation IEP Predict GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Predict GO terms from Neighborhoods
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0016556 mRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0016573 histone acetylation IEP Predict GO terms from Neighborhoods
BP GO:0016575 histone deacetylation IEP Predict GO terms from Neighborhoods
MF GO:0016881 acid-amino acid ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0017136 NAD-dependent histone deacetylase activity IEP Predict GO terms from Neighborhoods
BP GO:0018364 peptidyl-glutamine methylation IEP Predict GO terms from Neighborhoods
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
BP GO:0018394 peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
MF GO:0019213 deacetylase activity IEP Predict GO terms from Neighborhoods
BP GO:0022402 cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Predict GO terms from Neighborhoods
BP GO:0030488 tRNA methylation IEP Predict GO terms from Neighborhoods
CC GO:0030874 nucleolar chromatin IEP Predict GO terms from Neighborhoods
BP GO:0030953 astral microtubule organization IEP Predict GO terms from Neighborhoods
BP GO:0031110 regulation of microtubule polymerization or depolymerization IEP Predict GO terms from Neighborhoods
BP GO:0031112 positive regulation of microtubule polymerization or depolymerization IEP Predict GO terms from Neighborhoods
BP GO:0031113 regulation of microtubule polymerization IEP Predict GO terms from Neighborhoods
BP GO:0031116 positive regulation of microtubule polymerization IEP Predict GO terms from Neighborhoods
BP GO:0031426 polycistronic mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0031940 obsolete positive regulation of chromatin silencing at telomere IEP Predict GO terms from Neighborhoods
MF GO:0032129 histone deacetylase activity (H3-K9 specific) IEP Predict GO terms from Neighborhoods
BP GO:0032206 positive regulation of telomere maintenance IEP Predict GO terms from Neighborhoods
BP GO:0032259 methylation IEP Predict GO terms from Neighborhoods
BP GO:0032273 positive regulation of protein polymerization IEP Predict GO terms from Neighborhoods
BP GO:0032467 positive regulation of cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0032886 regulation of microtubule-based process IEP Predict GO terms from Neighborhoods
BP GO:0033043 regulation of organelle organization IEP Predict GO terms from Neighborhoods
MF GO:0033558 protein lysine deacetylase activity IEP Predict GO terms from Neighborhoods
BP GO:0033566 gamma-tubulin complex localization IEP Predict GO terms from Neighborhoods
BP GO:0034661 ncRNA catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0034739 histone deacetylase activity (H4-K16 specific) IEP Predict GO terms from Neighborhoods
MF GO:0034979 NAD-dependent protein deacetylase activity IEP Predict GO terms from Neighborhoods
MF GO:0035198 miRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0036048 protein desuccinylation IEP Predict GO terms from Neighborhoods
BP GO:0036049 peptidyl-lysine desuccinylation IEP Predict GO terms from Neighborhoods
MF GO:0036055 protein-succinyllysine desuccinylase activity IEP Predict GO terms from Neighborhoods
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042558 pteridine-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0043015 gamma-tubulin binding IEP Predict GO terms from Neighborhoods
BP GO:0043414 macromolecule methylation IEP Predict GO terms from Neighborhoods
BP GO:0043470 regulation of carbohydrate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043543 protein acylation IEP Predict GO terms from Neighborhoods
BP GO:0043628 small regulatory ncRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0043970 histone H3-K9 acetylation IEP Predict GO terms from Neighborhoods
MF GO:0044748 3'-5'-exoribonuclease activity involved in mature miRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0045765 regulation of angiogenesis IEP Predict GO terms from Neighborhoods
BP GO:0045766 positive regulation of angiogenesis IEP Predict GO terms from Neighborhoods
BP GO:0045820 negative regulation of glycolytic process IEP Predict GO terms from Neighborhoods
BP GO:0045940 positive regulation of steroid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045980 negative regulation of nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046324 regulation of glucose import IEP Predict GO terms from Neighborhoods
BP GO:0046325 negative regulation of glucose import IEP Predict GO terms from Neighborhoods
BP GO:0046825 regulation of protein export from nucleus IEP Predict GO terms from Neighborhoods
MF GO:0046969 NAD-dependent histone deacetylase activity (H3-K9 specific) IEP Predict GO terms from Neighborhoods
BP GO:0048145 regulation of fibroblast proliferation IEP Predict GO terms from Neighborhoods
BP GO:0048146 positive regulation of fibroblast proliferation IEP Predict GO terms from Neighborhoods
BP GO:0048285 organelle fission IEP Predict GO terms from Neighborhoods
BP GO:0048446 petal morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050679 positive regulation of epithelial cell proliferation IEP Predict GO terms from Neighborhoods
MF GO:0051011 microtubule minus-end binding IEP Predict GO terms from Neighborhoods
BP GO:0051225 spindle assembly IEP Predict GO terms from Neighborhoods
BP GO:0051493 regulation of cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0060236 regulation of mitotic spindle organization IEP Predict GO terms from Neighborhoods
MF GO:0061608 nuclear import signal receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0061647 histone H3-K9 modification IEP Predict GO terms from Neighborhoods
MF GO:0061697 protein-glutaryllysine deglutarylase activity IEP Predict GO terms from Neighborhoods
BP GO:0061698 protein deglutarylation IEP Predict GO terms from Neighborhoods
MF GO:0061980 regulatory RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0062176 R-loop disassembly IEP Predict GO terms from Neighborhoods
MF GO:0070403 NAD+ binding IEP Predict GO terms from Neighborhoods
BP GO:0070507 regulation of microtubule cytoskeleton organization IEP Predict GO terms from Neighborhoods
CC GO:0070652 HAUS complex IEP Predict GO terms from Neighborhoods
BP GO:0070932 histone H3 deacetylation IEP Predict GO terms from Neighborhoods
BP GO:0072091 regulation of stem cell proliferation IEP Predict GO terms from Neighborhoods
CC GO:0072686 mitotic spindle IEP Predict GO terms from Neighborhoods
BP GO:0080175 phragmoplast microtubule organization IEP Predict GO terms from Neighborhoods
BP GO:0090030 regulation of steroid hormone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0090058 metaxylem development IEP Predict GO terms from Neighborhoods
BP GO:0090063 positive regulation of microtubule nucleation IEP Predict GO terms from Neighborhoods
BP GO:0090224 regulation of spindle organization IEP Predict GO terms from Neighborhoods
BP GO:0090351 seedling development IEP Predict GO terms from Neighborhoods
BP GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic IEP Predict GO terms from Neighborhoods
MF GO:0097372 NAD-dependent histone deacetylase activity (H3-K18 specific) IEP Predict GO terms from Neighborhoods
CC GO:0098687 chromosomal region IEP Predict GO terms from Neighborhoods
CC GO:0099080 supramolecular complex IEP Predict GO terms from Neighborhoods
CC GO:0099081 supramolecular polymer IEP Predict GO terms from Neighborhoods
CC GO:0099115 chromosome, subtelomeric region IEP Predict GO terms from Neighborhoods
CC GO:0099512 supramolecular fiber IEP Predict GO terms from Neighborhoods
CC GO:0099513 polymeric cytoskeletal fiber IEP Predict GO terms from Neighborhoods
BP GO:0106230 protein depropionylation IEP Predict GO terms from Neighborhoods
MF GO:0106231 protein-propionyllysine depropionylase activity IEP Predict GO terms from Neighborhoods
BP GO:0120161 regulation of cold-induced thermogenesis IEP Predict GO terms from Neighborhoods
BP GO:0120162 positive regulation of cold-induced thermogenesis IEP Predict GO terms from Neighborhoods
BP GO:0140013 meiotic nuclear division IEP Predict GO terms from Neighborhoods
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predict GO terms from Neighborhoods
BP GO:0140694 non-membrane-bounded organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:0140747 regulation of ncRNA transcription IEP Predict GO terms from Neighborhoods
BP GO:1900543 negative regulation of purine nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1900865 chloroplast RNA modification IEP Predict GO terms from Neighborhoods
BP GO:1900871 chloroplast mRNA modification IEP Predict GO terms from Neighborhoods
BP GO:1901342 regulation of vasculature development IEP Predict GO terms from Neighborhoods
BP GO:1901483 regulation of transcription factor catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901485 positive regulation of transcription factor catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901836 regulation of transcription of nucleolar large rRNA by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:1902446 regulation of shade avoidance IEP Predict GO terms from Neighborhoods
BP GO:1902448 positive regulation of shade avoidance IEP Predict GO terms from Neighborhoods
BP GO:1902732 positive regulation of chondrocyte proliferation IEP Predict GO terms from Neighborhoods
BP GO:1903046 meiotic cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:1903579 negative regulation of ATP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1904018 positive regulation of vasculature development IEP Predict GO terms from Neighborhoods
BP GO:1905330 regulation of morphogenesis of an epithelium IEP Predict GO terms from Neighborhoods
BP GO:1905332 positive regulation of morphogenesis of an epithelium IEP Predict GO terms from Neighborhoods
BP GO:1905549 obsolete positive regulation of subtelomeric heterochromatin assembly IEP Predict GO terms from Neighborhoods
BP GO:1905553 regulation of blood vessel branching IEP Predict GO terms from Neighborhoods
BP GO:1905555 positive regulation of blood vessel branching IEP Predict GO terms from Neighborhoods
BP GO:1905562 regulation of vascular endothelial cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:1905564 positive regulation of vascular endothelial cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:1990258 histone glutamine methylation IEP Predict GO terms from Neighborhoods
BP GO:2000232 regulation of rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:2000234 positive regulation of rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:2000488 positive regulation of brassinosteroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000648 positive regulation of stem cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:2000694 regulation of phragmoplast microtubule organization IEP Predict GO terms from Neighborhoods
BP GO:2001032 regulation of double-strand break repair via nonhomologous end joining IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR015300 DNA-bd_pseudobarrel_sf 2 102
IPR015300 DNA-bd_pseudobarrel_sf 461 559
IPR015300 DNA-bd_pseudobarrel_sf 249 356
IPR003340 B3_DNA-bd 254 348
IPR003340 B3_DNA-bd 476 559
IPR003340 B3_DNA-bd 14 99
No external refs found!