SOLTUB.AGRIA.G00000016818

Description : Alpha-amylase

Gene families : OG_02_0014560 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000016818
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_57

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004556	alpha-amylase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	AHRD
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005982	starch metabolic process	None	Extended
BP	GO:0005983	starch catabolic process	IEA	AHRD
BP	GO:0005984	disaccharide metabolic process	None	Extended
BP	GO:0005985	sucrose metabolic process	None	Extended
BP	GO:0005987	sucrose catabolic process	IEA	AHRD
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009251	glucan catabolic process	None	Extended
BP	GO:0009311	oligosaccharide metabolic process	None	Extended
BP	GO:0009313	oligosaccharide catabolic process	None	Extended
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009570	chloroplast stroma	IEA	AHRD
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IEA	AHRD
BP	GO:0009739	response to gibberellin	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044247	cellular polysaccharide catabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0044275	cellular carbohydrate catabolic process	None	Extended
BP	GO:0046352	disaccharide catabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
CC	GO:0048046	apoplast	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001505	regulation of neurotransmitter levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0001775	cell activation	IEP	Predict GO terms from Neighborhoods
MF	GO:0004143	diacylglycerol kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005227	calcium activated cation channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005261	cation channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005543	phospholipid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006629	lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006636	unsaturated fatty acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006638	neutral lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006639	acylglycerol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006641	triglyceride metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006643	membrane lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006654	phosphatidic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006665	sphingolipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006672	ceramide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006970	response to osmotic stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0007205	protein kinase C-activating G protein-coupled receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0007635	chemosensory behavior	IEP	Predict GO terms from Neighborhoods
CC	GO:0008021	synaptic vesicle	IEP	Predict GO terms from Neighborhoods
MF	GO:0008289	lipid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008381	mechanosensitive ion channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008610	lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009628	response to abiotic stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0009931	calcium-dependent protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009966	regulation of signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0009968	negative regulation of signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0010037	response to carbon dioxide	IEP	Predict GO terms from Neighborhoods
BP	GO:0010359	regulation of anion channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010555	response to mannitol	IEP	Predict GO terms from Neighborhoods
BP	GO:0010646	regulation of cell communication	IEP	Predict GO terms from Neighborhoods
BP	GO:0010648	negative regulation of cell communication	IEP	Predict GO terms from Neighborhoods
MF	GO:0010857	calcium-dependent protein kinase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0014069	postsynaptic density	IEP	Predict GO terms from Neighborhoods
CC	GO:0016363	nuclear matrix	IEP	Predict GO terms from Neighborhoods
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Predict GO terms from Neighborhoods
BP	GO:0019218	regulation of steroid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019432	triglyceride biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0019897	extrinsic component of plasma membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0019899	enzyme binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019902	phosphatase binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019903	protein phosphatase binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0022836	gated channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022839	ion gated channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0023051	regulation of signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0023057	negative regulation of signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0030100	regulation of endocytosis	IEP	Predict GO terms from Neighborhoods
CC	GO:0030133	transport vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0030148	sphingolipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030168	platelet activation	IEP	Predict GO terms from Neighborhoods
CC	GO:0030173	integral component of Golgi membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0030176	integral component of endoplasmic reticulum membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0030258	lipid modification	IEP	Predict GO terms from Neighborhoods
CC	GO:0030424	axon	IEP	Predict GO terms from Neighborhoods
CC	GO:0030425	dendrite	IEP	Predict GO terms from Neighborhoods
CC	GO:0031227	intrinsic component of endoplasmic reticulum membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031228	intrinsic component of Golgi membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0032879	regulation of localization	IEP	Predict GO terms from Neighborhoods
MF	GO:0033188	sphingomyelin synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0033559	unsaturated fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042048	olfactory behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0043052	thermotaxis	IEP	Predict GO terms from Neighborhoods
BP	GO:0044070	regulation of anion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0044255	cellular lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0045140	inositol phosphoceramide synthase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0045211	postsynaptic membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0046339	diacylglycerol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046460	neutral lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046463	acylglycerol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046473	phosphatidic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046486	glycerolipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046513	ceramide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046834	lipid phosphorylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0047493	ceramide cholinephosphotransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048167	regulation of synaptic plasticity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048168	regulation of neuronal synaptic plasticity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048169	regulation of long-term neuronal synaptic plasticity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048364	root development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048366	leaf development	IEP	Predict GO terms from Neighborhoods
CC	GO:0048786	presynaptic active zone	IEP	Predict GO terms from Neighborhoods
BP	GO:0048827	phyllome development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050773	regulation of dendrite development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050804	modulation of chemical synaptic transmission	IEP	Predict GO terms from Neighborhoods
BP	GO:0050807	regulation of synapse organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051049	regulation of transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0070300	phosphatidic acid binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0070382	exocytic vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0071244	cellular response to carbon dioxide	IEP	Predict GO terms from Neighborhoods
BP	GO:0071484	cellular response to light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071485	cellular response to absence of light	IEP	Predict GO terms from Neighborhoods
BP	GO:0090036	regulation of protein kinase C signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0090038	negative regulation of protein kinase C signaling	IEP	Predict GO terms from Neighborhoods
CC	GO:0097060	synaptic membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098685	Schaffer collateral - CA1 synapse	IEP	Predict GO terms from Neighborhoods
CC	GO:0098978	glutamatergic synapse	IEP	Predict GO terms from Neighborhoods
BP	GO:0099175	regulation of postsynapse organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0099177	regulation of trans-synaptic signaling	IEP	Predict GO terms from Neighborhoods
CC	GO:0099243	extrinsic component of synaptic membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099572	postsynaptic specialization	IEP	Predict GO terms from Neighborhoods
BP	GO:1900242	regulation of synaptic vesicle endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:1900457	regulation of brassinosteroid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1900458	negative regulation of brassinosteroid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1902456	regulation of stomatal opening	IEP	Predict GO terms from Neighborhoods
BP	GO:1903421	regulation of synaptic vesicle recycling	IEP	Predict GO terms from Neighborhoods
BP	GO:1903959	regulation of anion transmembrane transport	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR006047	Glyco_hydro_13_cat_dom	45	296
IPR012850	A-amylase_bs_C	351	406
IPR017853	Glycoside_hydrolase_SF	24	339

External Links

No external refs found!

SOLTUB.AGRIA.G00000016818

Expression Profile

Co-expression Networks

Functional Annotation