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  5. SOLTUB.AGRIA.G00000016870

SOLTUB.AGRIA.G00000016870


Description : F-box/kelch-repeat protein


Gene families : OG_02_0014582 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000016870
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_231


Type GO Term Name Evidence Source
BP GO:0001558 regulation of cell growth IEA AHRD
BP GO:0008361 regulation of cell size IEA AHRD
CC GO:0009507 chloroplast IEA AHRD
CC GO:0019005 SCF ubiquitin ligase complex IEA AHRD
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Type GO Term Name Evidence Source
MF GO:0003680 minor groove of adenine-thymine-rich DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predict GO terms from Neighborhoods
MF GO:0004564 beta-fructofuranosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004575 sucrose alpha-glucosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0005216 ion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005217 intracellular ligand-gated ion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005221 intracellular cyclic nucleotide activated cation channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005223 intracellular cGMP-activated cation channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005244 voltage-gated ion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005249 voltage-gated potassium channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005261 cation channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005267 potassium channel activity IEP Predict GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Predict GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Predict GO terms from Neighborhoods
CC GO:0005739 mitochondrion IEP Predict GO terms from Neighborhoods
CC GO:0005776 autophagosome IEP Predict GO terms from Neighborhoods
CC GO:0005815 microtubule organizing center IEP Predict GO terms from Neighborhoods
CC GO:0005929 cilium IEP Predict GO terms from Neighborhoods
BP GO:0005987 sucrose catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006023 aminoglycan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006024 glycosaminoglycan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006029 proteoglycan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006073 cellular glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006873 cellular ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0007623 circadian rhythm IEP Predict GO terms from Neighborhoods
MF GO:0008810 cellulase activity IEP Predict GO terms from Neighborhoods
BP GO:0009101 glycoprotein biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009313 oligosaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009826 unidimensional cell growth IEP Predict GO terms from Neighborhoods
BP GO:0010027 thylakoid membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0010256 endomembrane system organization IEP Predict GO terms from Neighborhoods
BP GO:0010483 pollen tube reception IEP Predict GO terms from Neighborhoods
BP GO:0010528 regulation of transposition IEP Predict GO terms from Neighborhoods
BP GO:0010529 negative regulation of transposition IEP Predict GO terms from Neighborhoods
CC GO:0012505 endomembrane system IEP Predict GO terms from Neighborhoods
MF GO:0015020 glucuronosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0015035 protein-disulfide reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0015075 ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015267 channel activity IEP Predict GO terms from Neighborhoods
MF GO:0015276 ligand-gated ion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0015288 porin activity IEP Predict GO terms from Neighborhoods
CC GO:0016020 membrane IEP Predict GO terms from Neighborhoods
CC GO:0016021 integral component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0016052 carbohydrate catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0016324 apical plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predict GO terms from Neighborhoods
BP GO:0019725 cellular homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0022406 membrane docking IEP Predict GO terms from Neighborhoods
MF GO:0022803 passive transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0022829 wide pore channel activity IEP Predict GO terms from Neighborhoods
MF GO:0022832 voltage-gated channel activity IEP Predict GO terms from Neighborhoods
MF GO:0022834 ligand-gated channel activity IEP Predict GO terms from Neighborhoods
MF GO:0022836 gated channel activity IEP Predict GO terms from Neighborhoods
MF GO:0022843 voltage-gated cation channel activity IEP Predict GO terms from Neighborhoods
BP GO:0030003 cellular cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0030030 cell projection organization IEP Predict GO terms from Neighborhoods
BP GO:0030166 proteoglycan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0030182 neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030203 glycosaminoglycan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030245 cellulose catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0030551 cyclic nucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0030552 cAMP binding IEP Predict GO terms from Neighborhoods
MF GO:0030553 cGMP binding IEP Predict GO terms from Neighborhoods
CC GO:0031090 organelle membrane IEP Predict GO terms from Neighborhoods
CC GO:0031224 intrinsic component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031350 intrinsic component of plastid membrane IEP Predict GO terms from Neighborhoods
CC GO:0031351 integral component of plastid membrane IEP Predict GO terms from Neighborhoods
CC GO:0031354 intrinsic component of plastid outer membrane IEP Predict GO terms from Neighborhoods
CC GO:0031355 integral component of plastid outer membrane IEP Predict GO terms from Neighborhoods
CC GO:0031358 intrinsic component of chloroplast outer membrane IEP Predict GO terms from Neighborhoods
CC GO:0031359 integral component of chloroplast outer membrane IEP Predict GO terms from Neighborhoods
BP GO:0033135 regulation of peptidyl-serine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0033138 positive regulation of peptidyl-serine phosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predict GO terms from Neighborhoods
CC GO:0034426 etioplast membrane IEP Predict GO terms from Neighborhoods
BP GO:0035067 negative regulation of histone acetylation IEP Predict GO terms from Neighborhoods
CC GO:0035618 root hair IEP Predict GO terms from Neighborhoods
BP GO:0035970 peptidyl-threonine dephosphorylation IEP Predict GO terms from Neighborhoods
CC GO:0042995 cell projection IEP Predict GO terms from Neighborhoods
CC GO:0043005 neuron projection IEP Predict GO terms from Neighborhoods
BP GO:0043388 positive regulation of DNA binding IEP Predict GO terms from Neighborhoods
CC GO:0043680 filiform apparatus IEP Predict GO terms from Neighborhoods
MF GO:0043855 cyclic nucleotide-gated ion channel activity IEP Predict GO terms from Neighborhoods
BP GO:0044042 glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044275 cellular carbohydrate catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0044325 transmembrane transporter binding IEP Predict GO terms from Neighborhoods
BP GO:0044782 cilium organization IEP Predict GO terms from Neighborhoods
BP GO:0046352 disaccharide catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0046930 pore complex IEP Predict GO terms from Neighborhoods
MF GO:0047134 protein-disulfide reductase (NAD(P)) activity IEP Predict GO terms from Neighborhoods
BP GO:0048440 carpel development IEP Predict GO terms from Neighborhoods
BP GO:0048511 rhythmic process IEP Predict GO terms from Neighborhoods
BP GO:0048523 negative regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Predict GO terms from Neighborhoods
BP GO:0050654 chondroitin sulfate proteoglycan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0050790 regulation of catalytic activity IEP Predict GO terms from Neighborhoods
BP GO:0050877 nervous system process IEP Predict GO terms from Neighborhoods
BP GO:0051275 beta-glucan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051574 positive regulation of histone H3-K9 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051775 response to redox state IEP Predict GO terms from Neighborhoods
BP GO:0051776 detection of redox state IEP Predict GO terms from Neighborhoods
BP GO:0071731 response to nitric oxide IEP Predict GO terms from Neighborhoods
BP GO:0072337 modified amino acid transport IEP Predict GO terms from Neighborhoods
MF GO:0072349 modified amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0090599 alpha-glucosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0097272 ammonium homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0097275 cellular ammonium homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0097435 supramolecular fiber organization IEP Predict GO terms from Neighborhoods
CC GO:0097730 non-motile cilium IEP Predict GO terms from Neighborhoods
CC GO:0097731 9+0 non-motile cilium IEP Predict GO terms from Neighborhoods
CC GO:0097733 photoreceptor cell cilium IEP Predict GO terms from Neighborhoods
MF GO:0099094 ligand-gated cation channel activity IEP Predict GO terms from Neighborhoods
CC GO:0120025 plasma membrane bounded cell projection IEP Predict GO terms from Neighborhoods
BP GO:0120036 plasma membrane bounded cell projection organization IEP Predict GO terms from Neighborhoods
BP GO:0140056 organelle localization by membrane tethering IEP Predict GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Predict GO terms from Neighborhoods
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predict GO terms from Neighborhoods
BP GO:1900109 regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900111 positive regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900407 regulation of cellular response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:1901031 regulation of response to reactive oxygen species IEP Predict GO terms from Neighborhoods
BP GO:1901032 negative regulation of response to reactive oxygen species IEP Predict GO terms from Neighborhoods
BP GO:1901984 negative regulation of protein acetylation IEP Predict GO terms from Neighborhoods
BP GO:1902882 regulation of response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:1902883 negative regulation of response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:1903201 regulation of oxidative stress-induced cell death IEP Predict GO terms from Neighborhoods
BP GO:1903202 negative regulation of oxidative stress-induced cell death IEP Predict GO terms from Neighborhoods
BP GO:1903205 regulation of hydrogen peroxide-induced cell death IEP Predict GO terms from Neighborhoods
BP GO:1903206 negative regulation of hydrogen peroxide-induced cell death IEP Predict GO terms from Neighborhoods
BP GO:1903510 mucopolysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000169 regulation of peptidyl-cysteine S-nitrosylation IEP Predict GO terms from Neighborhoods
BP GO:2000170 positive regulation of peptidyl-cysteine S-nitrosylation IEP Predict GO terms from Neighborhoods
BP GO:2000757 negative regulation of peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011043 Gal_Oxase/kelch_b-propeller 198 525
IPR036047 F-box-like_dom_sf 134 204
IPR001810 F-box_dom 139 177
IPR006652 Kelch_1 225 279
No external refs found!