1. Home
  2. Species
  3. Solanum tuberosum Agria
  4. Sequence
  5. SOLTUB.AGRIA.G00000001793

SOLTUB.AGRIA.G00000001793


Description : Replication protein A 70 kDa DNA-binding subunit B


Gene families : OG_02_0000001 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000001793
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_114

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000001647 No alias Replication protein A 70 kDa DNA-binding subunit B 0.02 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000001959 No alias Replication protein A 70 kDa DNA-binding subunit B 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000005096 No alias Replication protein A 70 kDa DNA-binding subunit 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000006843 No alias Unknown protein 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000036686 No alias Unknown protein 0.05 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042663 No alias Unknown protein 0.05 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042679 No alias Replication protein a 70 kDa dna-binding subunit b 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000001647 No alias Replication protein A 70 kDa DNA-binding subunit B 0.02 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000001959 No alias Replication protein A 70 kDa DNA-binding subunit B 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000005096 No alias Replication protein A 70 kDa DNA-binding subunit 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000006843 No alias Unknown protein 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000036686 No alias Unknown protein 0.05 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042663 No alias Unknown protein 0.05 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042679 No alias Replication protein a 70 kDa dna-binding subunit b 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000001647 No alias Replication protein A 70 kDa DNA-binding subunit B 0.02 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000001959 No alias Replication protein A 70 kDa DNA-binding subunit B 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000005096 No alias Replication protein A 70 kDa DNA-binding subunit 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000006843 No alias Unknown protein 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000036686 No alias Unknown protein 0.05 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042663 No alias Unknown protein 0.05 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042679 No alias Replication protein a 70 kDa dna-binding subunit b 0.03 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000912 assembly of actomyosin apparatus involved in cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0000914 phragmoplast assembly IEP Predict GO terms from Neighborhoods
BP GO:0001944 vasculature development IEP Predict GO terms from Neighborhoods
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0004825 methionine-tRNA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0005216 ion channel activity IEP Predict GO terms from Neighborhoods
CC GO:0005819 spindle IEP Predict GO terms from Neighborhoods
BP GO:0006356 regulation of transcription by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:0006431 methionyl-tRNA aminoacylation IEP Predict GO terms from Neighborhoods
BP GO:0007349 cellularization IEP Predict GO terms from Neighborhoods
BP GO:0009556 microsporogenesis IEP Predict GO terms from Neighborhoods
CC GO:0009574 preprophase band IEP Predict GO terms from Neighborhoods
BP GO:0010235 guard mother cell cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0010245 radial microtubular system formation IEP Predict GO terms from Neighborhoods
BP GO:0010342 endosperm cellularization IEP Predict GO terms from Neighborhoods
MF GO:0015140 malate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015556 C4-dicarboxylate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015743 malate transport IEP Predict GO terms from Neighborhoods
CC GO:0017101 aminoacyl-tRNA synthetase multienzyme complex IEP Predict GO terms from Neighborhoods
CC GO:0017102 methionyl glutamyl tRNA synthetase complex IEP Predict GO terms from Neighborhoods
MF GO:0019825 oxygen binding IEP Predict GO terms from Neighborhoods
BP GO:0030150 protein import into mitochondrial matrix IEP Predict GO terms from Neighborhoods
BP GO:0032483 regulation of Rab protein signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0032506 cytokinetic process IEP Predict GO terms from Neighborhoods
BP GO:0033321 homomethionine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033506 glucosinolate biosynthetic process from homomethionine IEP Predict GO terms from Neighborhoods
BP GO:0034293 sexual sporulation IEP Predict GO terms from Neighborhoods
BP GO:0036119 response to platelet-derived growth factor IEP Predict GO terms from Neighborhoods
BP GO:0036120 cellular response to platelet-derived growth factor stimulus IEP Predict GO terms from Neighborhoods
BP GO:0045943 positive regulation of transcription by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:0048236 plant-type sporogenesis IEP Predict GO terms from Neighborhoods
MF GO:0070026 nitric oxide binding IEP Predict GO terms from Neighborhoods
BP GO:0070849 response to epidermal growth factor IEP Predict GO terms from Neighborhoods
BP GO:0071364 cellular response to epidermal growth factor stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071423 malate transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0071783 endoplasmic reticulum cisternal network organization IEP Predict GO terms from Neighborhoods
BP GO:0071784 endoplasmic reticulum cisternal network assembly IEP Predict GO terms from Neighborhoods
MF GO:0080102 3-methylthiopropyl glucosinolate S-oxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0080104 5-methylthiopropyl glucosinolate S-oxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0080105 6-methylthiopropyl glucosinolate S-oxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0080106 7-methylthiopropyl glucosinolate S-oxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0080107 8-methylthiopropyl glucosinolate S-oxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0090332 stomatal closure IEP Predict GO terms from Neighborhoods
CC GO:0097255 R2TP complex IEP Predict GO terms from Neighborhoods
BP GO:0140747 regulation of ncRNA transcription IEP Predict GO terms from Neighborhoods
BP GO:1901836 regulation of transcription of nucleolar large rRNA by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:1901838 positive regulation of transcription of nucleolar large rRNA by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:1902407 assembly of actomyosin apparatus involved in mitotic cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:1902410 mitotic cytokinetic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012340 NA-bd_OB-fold 340 416
IPR012340 NA-bd_OB-fold 111 214
IPR013955 Rep_factor-A_C 341 442
No external refs found!