SOLTUB.AGRIA.G00000017521

Description : Disease resistance protein RPP13

Gene families : OG_02_0000081 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000017521
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_114

Target	Alias	Description	ECC score	Gene Family Method
SOLTUB.AGRIA.G00000017568	No alias	Disease resistance protein RPP13	0.05	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000017568	No alias	Disease resistance protein RPP13	0.05	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000017568	No alias	Disease resistance protein RPP13	0.05	Orthogroups with 8 Potato genotypes

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0002376	immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	AHRD
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006955	immune response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008219	cell death	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009626	plant-type hypersensitive response	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0012501	programmed cell death	None	Extended
CC	GO:0016020	membrane	IEA	AHRD
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034050	programmed cell death induced by symbiont	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
MF	GO:0043531	ADP binding	IEA	AHRD
BP	GO:0044403	biological process involved in symbiotic interaction	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045087	innate immune response	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051702	biological process involved in interaction with symbiont	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000912	assembly of actomyosin apparatus involved in cytokinesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0000914	phragmoplast assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0001944	vasculature development	IEP	Predict GO terms from Neighborhoods
BP	GO:0002103	endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	IEP	Predict GO terms from Neighborhoods
MF	GO:0004557	alpha-galactosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004825	methionine-tRNA ligase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005819	spindle	IEP	Predict GO terms from Neighborhoods
CC	GO:0005874	microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0006356	regulation of transcription by RNA polymerase I	IEP	Predict GO terms from Neighborhoods
BP	GO:0006431	methionyl-tRNA aminoacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0007349	cellularization	IEP	Predict GO terms from Neighborhoods
MF	GO:0008017	microtubule binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0009048	dosage compensation by inactivation of X chromosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0009313	oligosaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009556	microsporogenesis	IEP	Predict GO terms from Neighborhoods
CC	GO:0009574	preprophase band	IEP	Predict GO terms from Neighborhoods
BP	GO:0010235	guard mother cell cytokinesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010245	radial microtubular system formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010342	endosperm cellularization	IEP	Predict GO terms from Neighborhoods
MF	GO:0015140	malate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015556	C4-dicarboxylate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015631	tubulin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0015743	malate transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0016752	sinapoyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016753	O-sinapoyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016754	sinapoylglucose-malate O-sinapoyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0017101	aminoacyl-tRNA synthetase multienzyme complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0017102	methionyl glutamyl tRNA synthetase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0022402	cell cycle process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030150	protein import into mitochondrial matrix	IEP	Predict GO terms from Neighborhoods
BP	GO:0031138	negative regulation of conjugation with cellular fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0032483	regulation of Rab protein signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0032506	cytokinetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033530	raffinose metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0033620	Mei2 nuclear dot complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0034064	Tor2-Mei2-Ste11 complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0034293	sexual sporulation	IEP	Predict GO terms from Neighborhoods
BP	GO:0034340	response to type I interferon	IEP	Predict GO terms from Neighborhoods
BP	GO:0034484	raffinose catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0036119	response to platelet-derived growth factor	IEP	Predict GO terms from Neighborhoods
BP	GO:0036120	cellular response to platelet-derived growth factor stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0045071	negative regulation of viral genome replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0045836	positive regulation of meiotic nuclear division	IEP	Predict GO terms from Neighborhoods
BP	GO:0045943	positive regulation of transcription by RNA polymerase I	IEP	Predict GO terms from Neighborhoods
MF	GO:0047274	galactinol-sucrose galactosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048236	plant-type sporogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048525	negative regulation of viral process	IEP	Predict GO terms from Neighborhoods
MF	GO:0052692	raffinose alpha-galactosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060816	random inactivation of X chromosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0070849	response to epidermal growth factor	IEP	Predict GO terms from Neighborhoods
BP	GO:0071364	cellular response to epidermal growth factor stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071423	malate transmembrane transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0097255	R2TP complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0099081	supramolecular polymer	IEP	Predict GO terms from Neighborhoods
CC	GO:0099512	supramolecular fiber	IEP	Predict GO terms from Neighborhoods
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	Predict GO terms from Neighborhoods
BP	GO:0110046	signal transduction involved in cell cycle switching, mitotic to meiotic cell cycle	IEP	Predict GO terms from Neighborhoods
MF	GO:0140311	protein sequestering activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140313	molecular sequestering activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0140538	negative regulation of conjugation with zygote	IEP	Predict GO terms from Neighborhoods
BP	GO:0140747	regulation of ncRNA transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:1900095	regulation of dosage compensation by inactivation of X chromosome	IEP	Predict GO terms from Neighborhoods
BP	GO:1901836	regulation of transcription of nucleolar large rRNA by RNA polymerase I	IEP	Predict GO terms from Neighborhoods
BP	GO:1901838	positive regulation of transcription of nucleolar large rRNA by RNA polymerase I	IEP	Predict GO terms from Neighborhoods
BP	GO:1901993	regulation of meiotic cell cycle phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:1901995	positive regulation of meiotic cell cycle phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:1902102	regulation of metaphase/anaphase transition of meiotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:1902104	positive regulation of metaphase/anaphase transition of meiotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:1902407	assembly of actomyosin apparatus involved in mitotic cytokinesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1902410	mitotic cytokinetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1905132	regulation of meiotic chromosome separation	IEP	Predict GO terms from Neighborhoods
BP	GO:1905134	positive regulation of meiotic chromosome separation	IEP	Predict GO terms from Neighborhoods
BP	GO:1905189	regulation of metaphase/anaphase transition of meiosis II	IEP	Predict GO terms from Neighborhoods
BP	GO:1905191	positive regulation of metaphase/anaphase transition of meiosis II	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	439	554
IPR002182	NB-ARC	556	644
IPR021929	Late_blight_resistance_R1	55	246
IPR027417	P-loop_NTPase	427	648

External Links

No external refs found!

SOLTUB.AGRIA.G00000017521

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation