SOLTUB.AGRIA.G00000017523

Description : R1

Gene families : OG_02_0000586 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000017523
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_236

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0002376	immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	AHRD
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006955	immune response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008219	cell death	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009626	plant-type hypersensitive response	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0012501	programmed cell death	None	Extended
CC	GO:0016020	membrane	IEA	AHRD
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034050	programmed cell death induced by symbiont	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
MF	GO:0043531	ADP binding	IEA	AHRD
BP	GO:0044403	biological process involved in symbiotic interaction	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045087	innate immune response	None	Extended
MF	GO:0046872	metal ion binding	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051702	biological process involved in interaction with symbiont	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000022	mitotic spindle elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0000741	karyogamy	IEP	Predict GO terms from Neighborhoods
BP	GO:0000742	karyogamy involved in conjugation with cellular fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0000743	nuclear migration involved in conjugation with cellular fusion	IEP	Predict GO terms from Neighborhoods
CC	GO:0000776	kinetochore	IEP	Predict GO terms from Neighborhoods
BP	GO:0001541	ovarian follicle development	IEP	Predict GO terms from Neighborhoods
BP	GO:0001944	vasculature development	IEP	Predict GO terms from Neighborhoods
MF	GO:0003774	cytoskeletal motor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003777	microtubule motor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005816	spindle pole body	IEP	Predict GO terms from Neighborhoods
CC	GO:0005871	kinesin complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006627	protein processing involved in protein targeting to mitochondrion	IEP	Predict GO terms from Neighborhoods
BP	GO:0006801	superoxide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007062	sister chromatid cohesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0007064	mitotic sister chromatid cohesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0007097	nuclear migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0007368	determination of left/right symmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0007507	heart development	IEP	Predict GO terms from Neighborhoods
BP	GO:0008015	blood circulation	IEP	Predict GO terms from Neighborhoods
CC	GO:0008278	cohesin complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0008569	minus-end-directed microtubule motor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008608	attachment of spindle microtubules to kinetochore	IEP	Predict GO terms from Neighborhoods
BP	GO:0009799	specification of symmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0009855	determination of bilateral symmetry	IEP	Predict GO terms from Neighborhoods
BP	GO:0009953	dorsal/ventral pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0021915	neural tube development	IEP	Predict GO terms from Neighborhoods
BP	GO:0022904	respiratory electron transport chain	IEP	Predict GO terms from Neighborhoods
BP	GO:0030473	nuclear migration along microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0030728	ovulation	IEP	Predict GO terms from Neighborhoods
BP	GO:0030900	forebrain development	IEP	Predict GO terms from Neighborhoods
BP	GO:0031023	microtubule organizing center organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0033108	mitochondrial respiratory chain complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0034982	mitochondrial protein processing	IEP	Predict GO terms from Neighborhoods
CC	GO:0042720	mitochondrial inner membrane peptidase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0044380	protein localization to cytoskeleton	IEP	Predict GO terms from Neighborhoods
CC	GO:0044732	mitotic spindle pole body	IEP	Predict GO terms from Neighborhoods
CC	GO:0044815	DNA packaging complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0046864	isoprenoid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0046865	terpenoid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0051177	meiotic sister chromatid cohesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0051231	spindle elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051276	chromosome organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051316	attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051455	monopolar spindle attachment to meiosis I kinetochore	IEP	Predict GO terms from Neighborhoods
BP	GO:0051647	nucleus localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051754	meiotic sister chromatid cohesion, centromeric	IEP	Predict GO terms from Neighborhoods
BP	GO:0060236	regulation of mitotic spindle organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0060271	cilium assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0061300	cerebellum vasculature development	IEP	Predict GO terms from Neighborhoods
BP	GO:0070601	centromeric sister chromatid cohesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0071988	protein localization to spindle pole body	IEP	Predict GO terms from Neighborhoods
BP	GO:0071989	establishment of protein localization to spindle pole body	IEP	Predict GO terms from Neighborhoods
BP	GO:0072384	organelle transport along microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0072698	protein localization to microtubule cytoskeleton	IEP	Predict GO terms from Neighborhoods
BP	GO:0090224	regulation of spindle organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0090307	mitotic spindle assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0098840	protein transport along microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0099118	microtubule-based protein transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1902440	protein localization to mitotic spindle pole body	IEP	Predict GO terms from Neighborhoods
BP	GO:1905508	protein localization to microtubule organizing center	IEP	Predict GO terms from Neighborhoods
BP	GO:1990852	protein transport along microtubule to spindle pole body	IEP	Predict GO terms from Neighborhoods
BP	GO:1990976	protein transport along microtubule to mitotic spindle pole body	IEP	Predict GO terms from Neighborhoods
BP	GO:2000032	regulation of secondary shoot formation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR021929	Late_blight_resistance_R1	88	350

External Links

No external refs found!

SOLTUB.AGRIA.G00000017523

Expression Profile

Co-expression Networks

Functional Annotation