SOLTUB.AGRIA.G00000019128

Description : YELLOW STRIPE like 7

Gene families : OG_02_0000205 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000019128
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_323

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005774	vacuolar membrane	None	Extended
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006826	iron ion transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009526	plastid envelope	IEA	AHRD
CC	GO:0009705	plant-type vacuole membrane	IEA	AHRD
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010039	response to iron ion	IEA	AHRD
BP	GO:0010043	response to zinc ion	IEA	AHRD
CC	GO:0016020	membrane	None	Extended
BP	GO:0022414	reproductive process	None	Extended
MF	GO:0022857	transmembrane transporter activity	IEA	AHRD
BP	GO:0030001	metal ion transport	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034220	ion transmembrane transport	None	Extended
BP	GO:0034755	iron ion transmembrane transport	IEA	AHRD
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0048316	seed development	IEA	AHRD
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
BP	GO:0098655	cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002933	lipid hydroxylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0003860	3-hydroxyisobutyryl-CoA hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004321	fatty-acyl-CoA synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004467	long-chain fatty acid-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005576	extracellular region	IEP	Predict GO terms from Neighborhoods
CC	GO:0005783	endoplasmic reticulum	IEP	Predict GO terms from Neighborhoods
BP	GO:0006066	alcohol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006163	purine nucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006574	valine catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006637	acyl-CoA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006772	thiamine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007060	male meiosis chromosome segregation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009228	thiamine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009259	ribonucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010032	meiotic chromosome condensation	IEP	Predict GO terms from Neighborhoods
CC	GO:0010282	senescence-associated vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0010345	suberin biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0015105	arsenite transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015115	silicate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0015630	microtubule cytoskeleton	IEP	Predict GO terms from Neighborhoods
BP	GO:0015700	arsenite transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015708	silicic acid import across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0015840	urea transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016055	Wnt signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0016207	4-coumarate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016210	naringenin-chalcone synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016297	acyl-[acyl-carrier-protein] hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016408	C-acyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016746	acyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0016790	thiolester hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0018458	isopiperitenol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0018459	carveol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0018858	benzoate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019693	ribose phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019755	one-carbon compound transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0030638	polyketide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030639	polyketide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031341	regulation of cell killing	IEP	Predict GO terms from Neighborhoods
BP	GO:0031524	menthol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031525	menthol biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0031956	medium-chain fatty acid-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0033494	ferulate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034309	primary alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0035337	fatty-acyl-CoA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0035383	thioester metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0035445	borate transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0042131	thiamine phosphate phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042631	cellular response to water deprivation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042723	thiamine-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042724	thiamine-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045132	meiotic chromosome segregation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046165	alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046713	borate transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0046715	active borate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0046949	fatty-acyl-CoA biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048235	pollen sperm cell differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0050062	long-chain-fatty-acyl-CoA reductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050563	trans-feruloyl-CoA synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050734	hydroxycinnamoyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051709	regulation of killing of cells of another organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0051791	medium-chain fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051792	medium-chain fatty acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051839	regulation by host of cytolysis of symbiont cells	IEP	Predict GO terms from Neighborhoods
BP	GO:0051841	positive regulation by host of cytolysis of symbiont cells	IEP	Predict GO terms from Neighborhoods
MF	GO:0052722	fatty acid in-chain hydroxylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071462	cellular response to water stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071465	cellular response to desiccation	IEP	Predict GO terms from Neighborhoods
BP	GO:0072521	purine-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080110	sporopollenin biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0090439	tetraketide alpha-pyrone synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0098658	inorganic anion import across plasma membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0102965	alcohol-forming fatty acyl-CoA reductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0106286	(E)-caffeate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0106290	trans-cinnamate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901568	fatty acid derivative metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901570	fatty acid derivative biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902075	cellular response to salt	IEP	Predict GO terms from Neighborhoods
BP	GO:1903173	fatty alcohol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903175	fatty alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1904550	response to arachidonic acid	IEP	Predict GO terms from Neighborhoods
BP	GO:1905114	cell surface receptor signaling pathway involved in cell-cell signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:1990169	stress response to copper ion	IEP	Predict GO terms from Neighborhoods
MF	GO:1990188	euchromatin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1990868	response to chemokine	IEP	Predict GO terms from Neighborhoods
BP	GO:1990869	cellular response to chemokine	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004813	OPT	38	458
IPR004813	OPT	461	539
IPR004813	OPT	38	455

External Links

No external refs found!

SOLTUB.AGRIA.G00000019128

Expression Profile

Co-expression Networks

Functional Annotation