SOLTUB.AGRIA.G00000019288

Description : Cyclic nucleotide-gated ion channel-like protein

Gene families : OG_02_0043752 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000019288
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_99

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005217	intracellular ligand-gated ion channel activity	None	Extended
MF	GO:0005221	intracellular cyclic nucleotide activated cation channel activity	None	Extended
MF	GO:0005223	intracellular cGMP-activated cation channel activity	IEA	AHRD
MF	GO:0005261	cation channel activity	None	Extended
MF	GO:0005262	calcium channel activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005516	calmodulin binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006813	potassium ion transport	IEA	AHRD
BP	GO:0006873	cellular ion homeostasis	None	Extended
BP	GO:0006874	cellular calcium ion homeostasis	IEA	AHRD
BP	GO:0006875	cellular metal ion homeostasis	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
CC	GO:0009536	plastid	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	IEA	AHRD
BP	GO:0009620	response to fungus	IEA	AHRD
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009860	pollen tube growth	IEA	AHRD
BP	GO:0009877	nodulation	IEA	AHRD
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015085	calcium ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated ion channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	IEA	AHRD
BP	GO:0016049	cell growth	None	Extended
CC	GO:0016324	apical plasma membrane	IEA	AHRD
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
BP	GO:0019725	cellular homeostasis	None	Extended
BP	GO:0022414	reproductive process	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0030003	cellular cation homeostasis	None	Extended
MF	GO:0030551	cyclic nucleotide binding	None	Extended
MF	GO:0030552	cAMP binding	IEA	AHRD
MF	GO:0030553	cGMP binding	IEA	AHRD
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031965	nuclear membrane	IEA	AHRD
BP	GO:0032502	developmental process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
BP	GO:0034220	ion transmembrane transport	None	Extended
CC	GO:0035618	root hair	IEA	AHRD
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036377	arbuscular mycorrhizal association	IEA	AHRD
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
CC	GO:0042995	cell projection	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043855	cyclic nucleotide-gated ion channel activity	None	Extended
MF	GO:0044325	transmembrane transporter binding	IEA	AHRD
BP	GO:0044403	biological process involved in symbiotic interaction	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0046686	response to cadmium ion	IEA	AHRD
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050801	ion homeostasis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0055065	metal ion homeostasis	None	Extended
BP	GO:0055074	calcium ion homeostasis	None	Extended
BP	GO:0055080	cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0072503	cellular divalent inorganic cation homeostasis	None	Extended
BP	GO:0072507	divalent inorganic cation homeostasis	None	Extended
CC	GO:0090406	pollen tube	IEA	AHRD
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0098590	plasma membrane region	None	Extended
BP	GO:0098655	cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	IEA	AHRD
BP	GO:0098771	inorganic ion homeostasis	None	Extended
MF	GO:0099094	ligand-gated cation channel activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0120025	plasma membrane bounded cell projection	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000255	allantoin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0000256	allantoin catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002237	response to molecule of bacterial origin	IEP	Predict GO terms from Neighborhoods
BP	GO:0002376	immune system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002682	regulation of immune system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002764	immune response-regulating signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0003953	NAD+ nucleosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004038	allantoinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005222	intracellular cAMP-activated cation channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005242	inward rectifier potassium channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005244	voltage-gated ion channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005249	voltage-gated potassium channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005267	potassium channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006144	purine nucleobase metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006145	purine nucleobase catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006816	calcium ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006955	immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0006995	cellular response to nitrogen starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0007165	signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0007263	nitric oxide mediated signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0008219	cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0009112	nucleobase metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009442	allantoin assimilation pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009595	detection of biotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009609	response to symbiotic bacterium	IEP	Predict GO terms from Neighborhoods
BP	GO:0009626	plant-type hypersensitive response	IEP	Predict GO terms from Neighborhoods
BP	GO:0010135	ureide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010136	ureide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0012501	programmed cell death	IEP	Predict GO terms from Neighborhoods
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016812	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides	IEP	Predict GO terms from Neighborhoods
BP	GO:0019932	second-messenger-mediated signaling	IEP	Predict GO terms from Neighborhoods
MF	GO:0022832	voltage-gated channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022843	voltage-gated cation channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0031663	lipopolysaccharide-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0032490	detection of molecule of bacterial origin	IEP	Predict GO terms from Neighborhoods
BP	GO:0032497	detection of lipopolysaccharide	IEP	Predict GO terms from Neighborhoods
BP	GO:0032870	cellular response to hormone stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0033612	receptor serine/threonine kinase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0034050	programmed cell death induced by symbiont	IEP	Predict GO terms from Neighborhoods
BP	GO:0035556	intracellular signal transduction	IEP	Predict GO terms from Neighborhoods
MF	GO:0038187	pattern recognition receptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043067	regulation of programmed cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0043562	cellular response to nitrogen levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0043605	cellular amide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045087	innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0046113	nucleobase catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046777	protein autophosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050776	regulation of immune response	IEP	Predict GO terms from Neighborhoods
MF	GO:0050897	cobalt ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051702	biological process involved in interaction with symbiont	IEP	Predict GO terms from Neighborhoods
BP	GO:0051716	cellular response to stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0070509	calcium ion import	IEP	Predict GO terms from Neighborhoods
BP	GO:0070588	calcium ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0070696	transmembrane receptor protein serine/threonine kinase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0071215	cellular response to abscisic acid stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071396	cellular response to lipid	IEP	Predict GO terms from Neighborhoods
BP	GO:0071446	cellular response to salicylic acid stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071495	cellular response to endogenous stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071805	potassium ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0072523	purine-containing compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0097306	cellular response to alcohol	IEP	Predict GO terms from Neighborhoods
BP	GO:0098542	defense response to other organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0098581	detection of external biotic stimulus	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR018490	cNMP-bd_dom_sf	245	311

External Links

No external refs found!

SOLTUB.AGRIA.G00000019288

Expression Profile

Co-expression Networks

Functional Annotation