SOLTUB.AGRIA.G00000019318

Description : E3 ubiquitin-protein ligase

Gene families : OG_02_0014924 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000019318
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_81

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEA	AHRD
BP	GO:0001752	compound eye photoreceptor fate commitment	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005739	mitochondrion	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007049	cell cycle	IEA	AHRD
BP	GO:0007276	gamete generation	None	Extended
BP	GO:0007465	R7 cell fate commitment	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	AHRD
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009968	negative regulation of signal transduction	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	IEA	AHRD
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEA	AHRD
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010648	negative regulation of cell communication	None	Extended
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0010942	positive regulation of cell death	None	Extended
CC	GO:0012505	endomembrane system	IEA	AHRD
CC	GO:0016020	membrane	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	AHRD
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023057	negative regulation of signaling	None	Extended
BP	GO:0030162	regulation of proteolysis	IEA	AHRD
BP	GO:0030163	protein catabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	IEA	AHRD
BP	GO:0032268	regulation of cellular protein metabolic process	IEA	AHRD
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042706	eye photoreceptor cell fate commitment	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IEA	AHRD
BP	GO:0042981	regulation of apoptotic process	None	Extended
BP	GO:0043065	positive regulation of apoptotic process	IEA	AHRD
BP	GO:0043066	negative regulation of apoptotic process	IEA	AHRD
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043068	positive regulation of programmed cell death	None	Extended
BP	GO:0043069	negative regulation of programmed cell death	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
BP	GO:0044088	regulation of vacuole organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0045165	cell fate commitment	None	Extended
BP	GO:0046552	photoreceptor cell fate commitment	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0048232	male gamete generation	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0048663	neuron fate commitment	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	IEA	AHRD
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	IEA	AHRD
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060548	negative regulation of cell death	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	AHRD
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080148	negative regulation of response to water deprivation	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1902115	regulation of organelle assembly	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
BP	GO:1902584	positive regulation of response to water deprivation	IEA	AHRD
CC	GO:1990234	transferase complex	None	Extended
BP	GO:2000070	regulation of response to water deprivation	None	Extended
BP	GO:2000785	regulation of autophagosome assembly	IEA	AHRD
BP	GO:2001233	regulation of apoptotic signaling pathway	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0000226	microtubule cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0001932	regulation of protein phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0001933	negative regulation of protein phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0003008	system process	IEP	Predict GO terms from Neighborhoods
CC	GO:0005769	early endosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005905	clathrin-coated pit	IEP	Predict GO terms from Neighborhoods
BP	GO:0006644	phospholipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006810	transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006836	neurotransmitter transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006897	endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0007010	cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007017	microtubule-based process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007018	microtubule-based movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0007610	behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0008037	cell recognition	IEP	Predict GO terms from Neighborhoods
BP	GO:0008038	neuron recognition	IEP	Predict GO terms from Neighborhoods
BP	GO:0008088	axo-dendritic transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0008589	regulation of smoothened signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009932	cell tip growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0010563	negative regulation of phosphorus metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010970	transport along microtubule	IEP	Predict GO terms from Neighborhoods
CC	GO:0012506	vesicle membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0015267	channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016198	axon choice point recognition	IEP	Predict GO terms from Neighborhoods
BP	GO:0016199	axon midline choice point recognition	IEP	Predict GO terms from Neighborhoods
BP	GO:0016311	dephosphorylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0016791	phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0021700	developmental maturation	IEP	Predict GO terms from Neighborhoods
MF	GO:0022803	passive transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030100	regulation of endocytosis	IEP	Predict GO terms from Neighborhoods
CC	GO:0030117	membrane coat	IEP	Predict GO terms from Neighborhoods
BP	GO:0030258	lipid modification	IEP	Predict GO terms from Neighborhoods
CC	GO:0030424	axon	IEP	Predict GO terms from Neighborhoods
CC	GO:0030425	dendrite	IEP	Predict GO terms from Neighborhoods
CC	GO:0030427	site of polarized growth	IEP	Predict GO terms from Neighborhoods
CC	GO:0030659	cytoplasmic vesicle membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0030705	cytoskeleton-dependent intracellular transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0031122	cytoplasmic microtubule organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031301	integral component of organelle membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031400	negative regulation of protein modification process	IEP	Predict GO terms from Neighborhoods
CC	GO:0031520	plasma membrane of cell tip	IEP	Predict GO terms from Neighborhoods
BP	GO:0032872	regulation of stress-activated MAPK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0032873	negative regulation of stress-activated MAPK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0034330	cell junction organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0034593	phosphatidylinositol bisphosphate phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0034595	phosphatidylinositol phosphate 5-phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0034596	phosphatidylinositol phosphate 4-phosphatase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0035619	root hair tip	IEP	Predict GO terms from Neighborhoods
CC	GO:0035838	growing cell tip	IEP	Predict GO terms from Neighborhoods
BP	GO:0042325	regulation of phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042326	negative regulation of phosphorylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0043005	neuron projection	IEP	Predict GO terms from Neighborhoods
CC	GO:0043025	neuronal cell body	IEP	Predict GO terms from Neighborhoods
BP	GO:0043408	regulation of MAPK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0043409	negative regulation of MAPK cascade	IEP	Predict GO terms from Neighborhoods
MF	GO:0043812	phosphatidylinositol-4-phosphate phosphatase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0044297	cell body	IEP	Predict GO terms from Neighborhoods
CC	GO:0045202	synapse	IEP	Predict GO terms from Neighborhoods
BP	GO:0045879	negative regulation of smoothened signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0045936	negative regulation of phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046328	regulation of JNK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0046329	negative regulation of JNK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0046434	organophosphate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046486	glycerolipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046664	dorsal closure, amnioserosa morphology change	IEP	Predict GO terms from Neighborhoods
BP	GO:0046839	phospholipid dephosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046856	phosphatidylinositol dephosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048259	regulation of receptor-mediated endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048488	synaptic vesicle endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048598	embryonic morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048729	tissue morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048768	root hair cell tip growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0050808	synapse organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051179	localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051234	establishment of localization	IEP	Predict GO terms from Neighborhoods
CC	GO:0051286	cell tip	IEP	Predict GO terms from Neighborhoods
MF	GO:0052744	phosphatidylinositol monophosphate phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052745	inositol phosphate phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052834	inositol monophosphate phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052866	phosphatidylinositol phosphate phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060074	synapse maturation	IEP	Predict GO terms from Neighborhoods
CC	GO:0060187	cell pole	IEP	Predict GO terms from Neighborhoods
BP	GO:0060627	regulation of vesicle-mediated transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0070302	regulation of stress-activated protein kinase signaling cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0070303	negative regulation of stress-activated protein kinase signaling cascade	IEP	Predict GO terms from Neighborhoods
CC	GO:0071683	sensory dendrite	IEP	Predict GO terms from Neighborhoods
BP	GO:0080135	regulation of cellular response to stress	IEP	Predict GO terms from Neighborhoods
CC	GO:0090404	pollen tube tip	IEP	Predict GO terms from Neighborhoods
BP	GO:0097435	supramolecular fiber organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0098590	plasma membrane region	IEP	Predict GO terms from Neighborhoods
CC	GO:0098796	membrane protein complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0098797	plasma membrane protein complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0099003	vesicle-mediated transport in synapse	IEP	Predict GO terms from Neighborhoods
BP	GO:0099111	microtubule-based transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0140238	presynaptic endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:1902532	negative regulation of intracellular signal transduction	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR018121	7-in-absentia-prot_TRAF-dom	113	312

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SOLTUB.AGRIA.G00000019318

Expression Profile

Co-expression Networks

Functional Annotation