SOLTUB.AGRIA.G00000019441

Description : Cyclin-d2-1

Gene families : OG_02_0009246 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000019441
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_46

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEA	AHRD
BP	GO:0000082	G1/S transition of mitotic cell cycle	IEA	AHRD
CC	GO:0000307	cyclin-dependent protein kinase holoenzyme complex	IEA	AHRD
BP	GO:0001932	regulation of protein phosphorylation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005737	cytoplasm	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009735	response to cytokinin	IEA	AHRD
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009744	response to sucrose	IEA	AHRD
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010444	guard mother cell differentiation	IEA	AHRD
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEA	AHRD
MF	GO:0019207	kinase regulator activity	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019887	protein kinase regulator activity	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034285	response to disaccharide	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042325	regulation of phosphorylation	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043549	regulation of kinase activity	None	Extended
BP	GO:0044770	cell cycle phase transition	None	Extended
BP	GO:0044772	mitotic cell cycle phase transition	None	Extended
BP	GO:0044843	cell cycle G1/S phase transition	None	Extended
BP	GO:0045859	regulation of protein kinase activity	None	Extended
BP	GO:0048316	seed development	IEA	AHRD
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051338	regulation of transferase activity	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071900	regulation of protein serine/threonine kinase activity	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1900618	regulation of shoot system morphogenesis	None	Extended
BP	GO:1901371	regulation of leaf morphogenesis	IEA	AHRD
BP	GO:1901700	response to oxygen-containing compound	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1902554	serine/threonine protein kinase complex	None	Extended
CC	GO:1902911	protein kinase complex	None	Extended
BP	GO:1903047	mitotic cell cycle process	None	Extended
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	None	Extended
BP	GO:1905421	regulation of plant organ morphogenesis	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002009	morphogenesis of an epithelium	IEP	Predict GO terms from Neighborhoods
CC	GO:0002178	palmitoyltransferase complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0003725	double-stranded RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0004521	endoribonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004525	ribonuclease III activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004540	ribonuclease activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005798	Golgi-associated vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0006353	DNA-templated transcription termination	IEP	Predict GO terms from Neighborhoods
BP	GO:0006401	RNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006497	protein lipidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006612	protein targeting to membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0007417	central nervous system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0008283	cell population proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0008544	epidermis development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009616	RNAi-mediated antiviral immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010050	vegetative phase change	IEP	Predict GO terms from Neighborhoods
BP	GO:0010216	maintenance of DNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010267	ta-siRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0010492	maintenance of shoot apical meristem identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010599	lsiRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0014013	regulation of gliogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0016409	palmitoyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016417	S-acyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016441	post-transcriptional gene silencing	IEP	Predict GO terms from Neighborhoods
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
BP	GO:0018198	peptidyl-cysteine modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0018230	peptidyl-L-cysteine S-palmitoylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0018231	peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine	IEP	Predict GO terms from Neighborhoods
BP	GO:0018345	protein palmitoylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0019706	protein-cysteine S-palmitoyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019707	protein-cysteine S-acyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0030133	transport vesicle	IEP	Predict GO terms from Neighborhoods
CC	GO:0030135	coated vesicle	IEP	Predict GO terms from Neighborhoods
CC	GO:0030136	clathrin-coated vesicle	IEP	Predict GO terms from Neighborhoods
CC	GO:0030140	trans-Golgi network transport vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0030182	neuron differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0030422	siRNA processing	IEP	Predict GO terms from Neighborhoods
CC	GO:0031228	intrinsic component of Golgi membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031332	RNAi effector complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0035194	post-transcriptional gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0035196	miRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0035295	tube development	IEP	Predict GO terms from Neighborhoods
CC	GO:0035618	root hair	IEP	Predict GO terms from Neighborhoods
BP	GO:0036404	obsolete conversion of ds siRNA to ss siRNA	IEP	Predict GO terms from Neighborhoods
MF	GO:0043849	Ras palmitoyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048589	developmental growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0048729	tissue morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050767	regulation of neurogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0051214	RNAi-mediated antiviral immunity against RNA virus	IEP	Predict GO terms from Neighborhoods
BP	GO:0051960	regulation of nervous system development	IEP	Predict GO terms from Neighborhoods
MF	GO:0061980	regulatory RNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0065001	specification of axis polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:0070918	small regulatory ncRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0070922	RISC complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0072359	circulatory system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0090150	establishment of protein localization to membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0090501	RNA phosphodiester bond hydrolysis	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004367	Cyclin_C-dom	139	197
IPR036915	Cyclin-like_sf	54	135

External Links

No external refs found!

SOLTUB.AGRIA.G00000019441

Expression Profile

Co-expression Networks

Functional Annotation