SOLTUB.AGRIA.G00000019742


Description : YELLOW STRIPE like 3


Gene families : OG_02_0000205 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000019742
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_189


Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IEA AHRD
CC GO:0009526 plastid envelope IEA AHRD
CC GO:0009705 plant-type vacuole membrane IEA AHRD
BP GO:0010039 response to iron ion IEA AHRD
BP GO:0010043 response to zinc ion IEA AHRD
BP GO:0034755 iron ion transmembrane transport IEA AHRD
BP GO:0048316 seed development IEA AHRD
MF GO:0051980 iron-nicotianamine transmembrane transporter activity IEA AHRD
Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Predict GO terms from Neighborhoods
MF GO:0001671 ATPase activator activity IEP Predict GO terms from Neighborhoods
MF GO:0004298 threonine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
CC GO:0005779 integral component of peroxisomal membrane IEP Predict GO terms from Neighborhoods
CC GO:0005839 proteasome core complex IEP Predict GO terms from Neighborhoods
CC GO:0005901 caveola IEP Predict GO terms from Neighborhoods
BP GO:0009635 response to herbicide IEP Predict GO terms from Neighborhoods
BP GO:0009636 response to toxic substance IEP Predict GO terms from Neighborhoods
BP GO:0009933 meristem structural organization IEP Predict GO terms from Neighborhoods
BP GO:0010094 specification of carpel identity IEP Predict GO terms from Neighborhoods
BP GO:0010158 abaxial cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010208 pollen wall assembly IEP Predict GO terms from Neighborhoods
BP GO:0010249 auxin conjugate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010254 nectary development IEP Predict GO terms from Neighborhoods
MF GO:0010279 indole-3-acetic acid amido synthetase activity IEP Predict GO terms from Neighborhoods
BP GO:0010450 inflorescence meristem growth IEP Predict GO terms from Neighborhoods
BP GO:0010584 pollen exine formation IEP Predict GO terms from Neighborhoods
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0016046 detection of fungus IEP Predict GO terms from Neighborhoods
MF GO:0016208 AMP binding IEP Predict GO terms from Neighborhoods
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016881 acid-amino acid ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predict GO terms from Neighborhoods
BP GO:0018874 benzoate metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0019774 proteasome core complex, beta-subunit complex IEP Predict GO terms from Neighborhoods
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predict GO terms from Neighborhoods
BP GO:0032781 positive regulation of ATP-dependent activity IEP Predict GO terms from Neighborhoods
CC GO:0034663 endoplasmic reticulum chaperone complex IEP Predict GO terms from Neighborhoods
BP GO:0034975 protein folding in endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0035002 liquid clearance, open tracheal system IEP Predict GO terms from Neighborhoods
BP GO:0035148 tube formation IEP Predict GO terms from Neighborhoods
BP GO:0035149 lumen formation, open tracheal system IEP Predict GO terms from Neighborhoods
BP GO:0035152 regulation of tube architecture, open tracheal system IEP Predict GO terms from Neighborhoods
BP GO:0035336 long-chain fatty-acyl-CoA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042045 epithelial fluid transport IEP Predict GO terms from Neighborhoods
CC GO:0044853 plasma membrane raft IEP Predict GO terms from Neighborhoods
BP GO:0045596 negative regulation of cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0046165 alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0048479 style development IEP Predict GO terms from Neighborhoods
BP GO:0048497 maintenance of floral organ identity IEP Predict GO terms from Neighborhoods
BP GO:0048832 specification of plant organ number IEP Predict GO terms from Neighborhoods
BP GO:0048833 specification of floral organ number IEP Predict GO terms from Neighborhoods
MF GO:0050062 long-chain-fatty-acyl-CoA reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0050768 negative regulation of neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0051176 positive regulation of sulfur metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0051787 misfolded protein binding IEP Predict GO terms from Neighborhoods
BP GO:0051961 negative regulation of nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0052318 regulation of phytoalexin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0052319 regulation of phytoalexin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0052320 positive regulation of phytoalexin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0052322 positive regulation of phytoalexin biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0052625 4-aminobenzoate amino acid synthetase activity IEP Predict GO terms from Neighborhoods
MF GO:0052626 benzoate amino acid synthetase activity IEP Predict GO terms from Neighborhoods
MF GO:0052627 vanillate amino acid synthetase activity IEP Predict GO terms from Neighborhoods
MF GO:0052628 4-hydroxybenzoate amino acid synthetase activity IEP Predict GO terms from Neighborhoods
BP GO:0060147 regulation of post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0060148 positive regulation of post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
MF GO:0070003 threonine-type peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0070059 intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
MF GO:0070406 glutamine binding IEP Predict GO terms from Neighborhoods
BP GO:0070633 transepithelial transport IEP Predict GO terms from Neighborhoods
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP Predict GO terms from Neighborhoods
BP GO:0090700 maintenance of plant organ identity IEP Predict GO terms from Neighborhoods
BP GO:0090706 specification of plant organ position IEP Predict GO terms from Neighborhoods
CC GO:0101031 chaperone complex IEP Predict GO terms from Neighborhoods
MF GO:0102053 (-)-jasmonoyl-isoleucine synthetase activity IEP Predict GO terms from Neighborhoods
MF GO:0102057 jasmonoyl-valine synthetase activity IEP Predict GO terms from Neighborhoods
MF GO:0102058 jasmonoyl-leucine synthetase activity IEP Predict GO terms from Neighborhoods
BP GO:1900368 regulation of post-transcriptional gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:1900370 positive regulation of post-transcriptional gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:1901182 regulation of camalexin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901183 positive regulation of camalexin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901568 fatty acid derivative metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901570 fatty acid derivative biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902183 regulation of shoot apical meristem development IEP Predict GO terms from Neighborhoods
BP GO:1903173 fatty alcohol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903175 fatty alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:1905369 endopeptidase complex IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004813 OPT 1 327
IPR004813 OPT 27 328
No external refs found!