Description : nuclear pore complex protein
Gene families : OG_02_0015023 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000019990 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_36 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | IEA | AHRD |
| BP | GO:0009987 | cellular process | IEA | AHRD |
| BP | GO:0033036 | macromolecule localization | IEA | AHRD |
| BP | GO:0071702 | organic substance transport | IEA | AHRD |
| BP | GO:0071705 | nitrogen compound transport | IEA | AHRD |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000725 | recombinational repair | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000792 | heterochromatin | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000993 | RNA polymerase II complex binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001098 | basal transcription machinery binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001099 | basal RNA polymerase II transcription machinery binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003684 | damaged DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005721 | pericentric heterochromatin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006282 | regulation of DNA repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006302 | double-strand break repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006310 | DNA recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006338 | chromatin remodeling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006353 | DNA-templated transcription termination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006369 | termination of RNA polymerase II transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006378 | mRNA polyadenylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006379 | mRNA cleavage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006482 | protein demethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008214 | protein dealkylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009612 | response to mechanical stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009741 | response to brassinosteroid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009756 | carbohydrate mediated signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009873 | ethylene-activated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009909 | regulation of flower development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009911 | positive regulation of flower development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010016 | shoot system morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010182 | sugar mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010212 | response to ionizing radiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016577 | histone demethylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031056 | regulation of histone modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031057 | negative regulation of histone modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031060 | regulation of histone methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031061 | negative regulation of histone methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031400 | negative regulation of protein modification process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031490 | chromatin DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032451 | demethylase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032452 | histone demethylase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032453 | histone H3-methyl-lysine-4 demethylase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032454 | histone H3-methyl-lysine-9 demethylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032995 | regulation of fungal-type cell wall biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033169 | histone H3-K9 demethylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0034647 | histone H3-tri/di/monomethyl-lysine-4 demethylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034720 | histone H3-K4 demethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035065 | regulation of histone acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035067 | negative regulation of histone acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035561 | regulation of chromatin binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035563 | positive regulation of chromatin binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0035861 | site of double-strand break | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040009 | regulation of growth rate | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040010 | positive regulation of growth rate | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040029 | epigenetic regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043175 | RNA polymerase core enzyme binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043631 | RNA polyadenylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045739 | positive regulation of DNA repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045814 | negative regulation of gene expression, epigenetic | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045815 | epigenetic maintenance of chromatin in transcription-competent conformation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045927 | positive regulation of growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048439 | flower morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048577 | negative regulation of short-day photoperiodism, flowering | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048579 | negative regulation of long-day photoperiodism, flowering | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048580 | regulation of post-embryonic development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048586 | regulation of long-day photoperiodism, flowering | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048587 | regulation of short-day photoperiodism, flowering | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048831 | regulation of shoot system development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050789 | regulation of biological process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051054 | positive regulation of DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051098 | regulation of binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051099 | positive regulation of binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051213 | dioxygenase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051239 | regulation of multicellular organismal process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051570 | regulation of histone H3-K9 methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051573 | negative regulation of histone H3-K9 methylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061629 | RNA polymerase II-specific DNA-binding transcription factor binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0065007 | biological regulation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070063 | RNA polymerase binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070076 | histone lysine demethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070988 | demethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071479 | cellular response to ionizing radiation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0071558 | histone H3-tri/di-methyl-lysine-27 demethylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090501 | RNA phosphodiester bond hydrolysis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0090734 | site of DNA damage | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140297 | DNA-binding transcription factor binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140457 | protein demethylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900112 | regulation of histone H3-K9 trimethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900113 | negative regulation of histone H3-K9 trimethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901983 | regulation of protein acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901984 | negative regulation of protein acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903338 | regulation of cell wall organization or biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000026 | regulation of multicellular organismal development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000028 | regulation of photoperiodism, flowering | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000241 | regulation of reproductive process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000242 | negative regulation of reproductive process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000756 | regulation of peptidyl-lysine acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000757 | negative regulation of peptidyl-lysine acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000779 | regulation of double-strand break repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000781 | positive regulation of double-strand break repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001020 | regulation of response to DNA damage stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001022 | positive regulation of response to DNA damage stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001032 | regulation of double-strand break repair via nonhomologous end joining | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001034 | positive regulation of double-strand break repair via nonhomologous end joining | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |