SOLTUB.AGRIA.G00000020002

Description : Charged multivesicular body protein 5

Gene families : OG_02_0003422 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000020002
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_46

Type	GO Term	Name	Evidence	Source
BP	GO:0001919	regulation of receptor recycling	IEA	AHRD
BP	GO:0002237	response to molecule of bacterial origin	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	AHRD
BP	GO:0006900	vesicle budding from membrane	IEA	AHRD
BP	GO:0006906	vesicle fusion	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0006997	nucleus organization	IEA	AHRD
BP	GO:0007032	endosome organization	IEA	AHRD
BP	GO:0007034	vacuolar transport	None	Extended
BP	GO:0007080	mitotic metaphase plate congression	IEA	AHRD
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0010008	endosome membrane	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010564	regulation of cell cycle process	None	Extended
BP	GO:0010824	regulation of centrosome duplication	IEA	AHRD
CC	GO:0012506	vesicle membrane	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016032	viral process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016050	vesicle organization	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0016197	endosomal transport	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
CC	GO:0030659	cytoplasmic vesicle membrane	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
CC	GO:0031902	late endosome membrane	None	Extended
BP	GO:0032495	response to muramyl dipeptide	None	Extended
BP	GO:0032496	response to lipopolysaccharide	None	Extended
BP	GO:0032506	cytokinetic process	None	Extended
BP	GO:0032509	endosome transport via multivesicular body sorting pathway	None	Extended
BP	GO:0032511	late endosome to vacuole transport via multivesicular body sorting pathway	IEA	AHRD
CC	GO:0032585	multivesicular body membrane	IEA	AHRD
BP	GO:0032886	regulation of microtubule-based process	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0045324	late endosome to vacuole transport	None	Extended
BP	GO:0046605	regulation of centrosome cycle	None	Extended
BP	GO:0046755	viral budding	IEA	AHRD
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048284	organelle fusion	None	Extended
BP	GO:0050000	chromosome localization	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051303	establishment of chromosome localization	None	Extended
BP	GO:0051310	metaphase plate congression	None	Extended
BP	GO:0051493	regulation of cytoskeleton organization	None	Extended
BP	GO:0051640	organelle localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051656	establishment of organelle localization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060236	regulation of mitotic spindle organization	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0061024	membrane organization	None	Extended
BP	GO:0061025	membrane fusion	None	Extended
BP	GO:0061763	multivesicular body-lysosome fusion	IEA	AHRD
BP	GO:0061952	midbody abscission	IEA	AHRD
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070507	regulation of microtubule cytoskeleton organization	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071216	cellular response to biotic stimulus	None	Extended
BP	GO:0071219	cellular response to molecule of bacterial origin	None	Extended
BP	GO:0071222	cellular response to lipopolysaccharide	IEA	AHRD
BP	GO:0071225	cellular response to muramyl dipeptide	IEA	AHRD
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071396	cellular response to lipid	None	Extended
BP	GO:0071417	cellular response to organonitrogen compound	None	Extended
BP	GO:0071495	cellular response to endogenous stimulus	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0071985	multivesicular body sorting pathway	None	Extended
BP	GO:0090169	regulation of spindle assembly	None	Extended
BP	GO:0090174	organelle membrane fusion	None	Extended
BP	GO:0090224	regulation of spindle organization	None	Extended
BP	GO:0097212	lysosomal membrane organization	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901652	response to peptide	None	Extended
BP	GO:1901653	cellular response to peptide	None	Extended
BP	GO:1901673	regulation of mitotic spindle assembly	IEA	AHRD
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901699	cellular response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended
BP	GO:1902115	regulation of organelle assembly	None	Extended
BP	GO:1902410	mitotic cytokinetic process	None	Extended
BP	GO:1903047	mitotic cell cycle process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000022	mitotic spindle elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0000105	histidine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0000162	tryptophan biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0000217	DNA secondary structure binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0000228	nuclear chromosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0000793	condensed chromosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0000794	condensed nuclear chromosome	IEP	Predict GO terms from Neighborhoods
MF	GO:0001221	transcription coregulator binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0001650	fibrillar center	IEP	Predict GO terms from Neighborhoods
BP	GO:0001889	liver development	IEP	Predict GO terms from Neighborhoods
BP	GO:0001947	heart looping	IEP	Predict GO terms from Neighborhoods
BP	GO:0002119	nematode larval development	IEP	Predict GO terms from Neighborhoods
BP	GO:0002164	larval development	IEP	Predict GO terms from Neighborhoods
BP	GO:0003143	embryonic heart tube morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0003680	minor groove of adenine-thymine-rich DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003949	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004477	methenyltetrahydrofolate cyclohydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004486	methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004488	methylenetetrahydrofolate dehydrogenase (NADP+) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Predict GO terms from Neighborhoods
BP	GO:0006520	cellular amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006547	histidine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006568	tryptophan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006586	indolalkylamine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006730	one-carbon metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007017	microtubule-based process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007059	chromosome segregation	IEP	Predict GO terms from Neighborhoods
BP	GO:0007088	regulation of mitotic nuclear division	IEP	Predict GO terms from Neighborhoods
BP	GO:0007517	muscle organ development	IEP	Predict GO terms from Neighborhoods
MF	GO:0008022	protein C-terminus binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008320	protein transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008564	protein-exporting ATPase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009309	amine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009853	photorespiration	IEP	Predict GO terms from Neighborhoods
BP	GO:0009952	anterior/posterior pattern specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0010469	regulation of signaling receptor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015450	protein-transporting ATPase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015462	ABC-type protein transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016574	histone ubiquitination	IEP	Predict GO terms from Neighborhoods
CC	GO:0016605	PML body	IEP	Predict GO terms from Neighborhoods
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Predict GO terms from Neighborhoods
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Predict GO terms from Neighborhoods
BP	GO:0017038	protein import	IEP	Predict GO terms from Neighborhoods
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0019238	cyclohydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019789	SUMO transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022884	macromolecule transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030097	hemopoiesis	IEP	Predict GO terms from Neighborhoods
CC	GO:0031371	ubiquitin conjugating enzyme complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0031522	cell envelope Sec protein transport complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0032093	SAM domain binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032868	response to insulin	IEP	Predict GO terms from Neighborhoods
BP	GO:0032869	cellular response to insulin stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0033143	regulation of intracellular steroid hormone receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0033145	positive regulation of intracellular steroid hormone receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0033233	regulation of protein sumoylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0033235	positive regulation of protein sumoylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035239	tube morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035999	tetrahydrofolate interconversion	IEP	Predict GO terms from Neighborhoods
BP	GO:0036306	embryonic heart tube elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043094	cellular metabolic compound salvage	IEP	Predict GO terms from Neighborhoods
BP	GO:0043122	regulation of I-kappaB kinase/NF-kappaB signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0043282	pharyngeal muscle development	IEP	Predict GO terms from Neighborhoods
MF	GO:0043398	HLH domain binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0043425	bHLH transcription factor binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043436	oxoacid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043952	protein transport by the Sec complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0044030	regulation of DNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0044388	small protein activating enzyme binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0045132	meiotic chromosome segregation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045143	homologous chromosome segregation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046219	indolalkylamine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046653	tetrahydrofolate metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0047429	nucleoside triphosphate diphosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048534	hematopoietic or lymphoid organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048872	homeostasis of number of cells	IEP	Predict GO terms from Neighborhoods
BP	GO:0051091	positive regulation of DNA-binding transcription factor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051231	spindle elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0060216	definitive hemopoiesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060562	epithelial tube morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0061061	muscle structure development	IEP	Predict GO terms from Neighborhoods
BP	GO:0061484	hematopoietic stem cell homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0061631	ubiquitin conjugating enzyme activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0061650	ubiquitin-like protein conjugating enzyme activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0061656	SUMO conjugating enzyme activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0065002	intracellular protein transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0070192	chromosome organization involved in meiotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0071375	cellular response to peptide hormone stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0071535	RING-like zinc finger domain binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0071806	protein transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0098813	nuclear chromosome segregation	IEP	Predict GO terms from Neighborhoods
MF	GO:0140318	protein transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140359	ABC-type transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0140535	intracellular protein-containing complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1903182	regulation of SUMO transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1903322	positive regulation of protein modification by small protein conjugation or removal	IEP	Predict GO terms from Neighborhoods
BP	GO:1903755	positive regulation of SUMO transferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:1990356	sumoylated E2 ligase complex	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR005024	Snf7_fam	13	206

External Links

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SOLTUB.AGRIA.G00000020002

Expression Profile

Co-expression Networks

Functional Annotation