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  5. SOLTUB.AGRIA.G00000020046

SOLTUB.AGRIA.G00000020046


Description : Pectate lyase


Gene families : OG_02_0022721 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000020046
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_33


Type GO Term Name Evidence Source
BP GO:0009624 response to nematode IEA AHRD
CC GO:0031225 anchored component of membrane IEA AHRD
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEA AHRD
BP GO:0098542 defense response to other organism IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000212 meiotic spindle organization IEP Predict GO terms from Neighborhoods
BP GO:0000272 polysaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0001654 eye development IEP Predict GO terms from Neighborhoods
BP GO:0001658 branching involved in ureteric bud morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0001709 cell fate determination IEP Predict GO terms from Neighborhoods
BP GO:0001736 establishment of planar polarity IEP Predict GO terms from Neighborhoods
BP GO:0001737 establishment of imaginal disc-derived wing hair orientation IEP Predict GO terms from Neighborhoods
BP GO:0001843 neural tube closure IEP Predict GO terms from Neighborhoods
MF GO:0001872 (1->3)-beta-D-glucan binding IEP Predict GO terms from Neighborhoods
CC GO:0002178 palmitoyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0003006 developmental process involved in reproduction IEP Predict GO terms from Neighborhoods
BP GO:0003007 heart morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predict GO terms from Neighborhoods
MF GO:0004650 polygalacturonase activity IEP Predict GO terms from Neighborhoods
MF GO:0005113 patched binding IEP Predict GO terms from Neighborhoods
MF GO:0005119 smoothened binding IEP Predict GO terms from Neighborhoods
MF GO:0005496 steroid binding IEP Predict GO terms from Neighborhoods
MF GO:0005539 glycosaminoglycan binding IEP Predict GO terms from Neighborhoods
CC GO:0005901 caveola IEP Predict GO terms from Neighborhoods
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006076 (1->3)-beta-D-glucan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006972 hyperosmotic response IEP Predict GO terms from Neighborhoods
BP GO:0007164 establishment of tissue polarity IEP Predict GO terms from Neighborhoods
BP GO:0007224 smoothened signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007275 multicellular organism development IEP Predict GO terms from Neighborhoods
BP GO:0007389 pattern specification process IEP Predict GO terms from Neighborhoods
BP GO:0007411 axon guidance IEP Predict GO terms from Neighborhoods
BP GO:0007444 imaginal disc development IEP Predict GO terms from Neighborhoods
MF GO:0008201 heparin binding IEP Predict GO terms from Neighborhoods
BP GO:0008203 cholesterol metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0009055 electron transfer activity IEP Predict GO terms from Neighborhoods
BP GO:0009553 embryo sac development IEP Predict GO terms from Neighborhoods
BP GO:0009608 response to symbiont IEP Predict GO terms from Neighborhoods
BP GO:0009610 response to symbiotic fungus IEP Predict GO terms from Neighborhoods
BP GO:0009653 anatomical structure morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009791 post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0009856 pollination IEP Predict GO terms from Neighborhoods
BP GO:0009954 proximal/distal pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0009957 epidermal cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010002 cardioblast differentiation IEP Predict GO terms from Neighborhoods
BP GO:0010157 response to chlorate IEP Predict GO terms from Neighborhoods
BP GO:0010874 regulation of cholesterol efflux IEP Predict GO terms from Neighborhoods
BP GO:0010875 positive regulation of cholesterol efflux IEP Predict GO terms from Neighborhoods
MF GO:0015334 high-affinity oligopeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015386 potassium:proton antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015485 cholesterol binding IEP Predict GO terms from Neighborhoods
MF GO:0016409 palmitoyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016417 S-acyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0018198 peptidyl-cysteine modification IEP Predict GO terms from Neighborhoods
BP GO:0018230 peptidyl-L-cysteine S-palmitoylation IEP Predict GO terms from Neighborhoods
BP GO:0018231 peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine IEP Predict GO terms from Neighborhoods
BP GO:0018345 protein palmitoylation IEP Predict GO terms from Neighborhoods
BP GO:0018996 molting cycle, collagen and cuticulin-based cuticle IEP Predict GO terms from Neighborhoods
MF GO:0019706 protein-cysteine S-palmitoyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0019707 protein-cysteine S-acyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0021515 cell differentiation in spinal cord IEP Predict GO terms from Neighborhoods
BP GO:0021522 spinal cord motor neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0021953 central nervous system neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0021997 neural plate axis specification IEP Predict GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Predict GO terms from Neighborhoods
MF GO:0022821 solute:potassium antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:0022900 electron transport chain IEP Predict GO terms from Neighborhoods
CC GO:0030140 trans-Golgi network transport vesicle IEP Predict GO terms from Neighborhoods
MF GO:0030247 polysaccharide binding IEP Predict GO terms from Neighborhoods
BP GO:0030326 embryonic limb morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0030332 cyclin binding IEP Predict GO terms from Neighborhoods
BP GO:0030856 regulation of epithelial cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030858 positive regulation of epithelial cell differentiation IEP Predict GO terms from Neighborhoods
CC GO:0031226 intrinsic component of plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0031228 intrinsic component of Golgi membrane IEP Predict GO terms from Neighborhoods
BP GO:0031290 retinal ganglion cell axon guidance IEP Predict GO terms from Neighborhoods
BP GO:0032370 positive regulation of lipid transport IEP Predict GO terms from Neighborhoods
BP GO:0032371 regulation of sterol transport IEP Predict GO terms from Neighborhoods
BP GO:0032373 positive regulation of sterol transport IEP Predict GO terms from Neighborhoods
BP GO:0032374 regulation of cholesterol transport IEP Predict GO terms from Neighborhoods
BP GO:0032376 positive regulation of cholesterol transport IEP Predict GO terms from Neighborhoods
BP GO:0032501 multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0032502 developmental process IEP Predict GO terms from Neighborhoods
MF GO:0032934 sterol binding IEP Predict GO terms from Neighborhoods
BP GO:0035051 cardiocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0035107 appendage morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035108 limb morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035113 embryonic appendage morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035137 hindlimb morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035148 tube formation IEP Predict GO terms from Neighborhoods
BP GO:0036314 response to sterol IEP Predict GO terms from Neighborhoods
BP GO:0036315 cellular response to sterol IEP Predict GO terms from Neighborhoods
BP GO:0040015 negative regulation of multicellular organism growth IEP Predict GO terms from Neighborhoods
BP GO:0042138 meiotic DNA double-strand break formation IEP Predict GO terms from Neighborhoods
BP GO:0042303 molting cycle IEP Predict GO terms from Neighborhoods
BP GO:0042538 hyperosmotic salinity response IEP Predict GO terms from Neighborhoods
BP GO:0042633 hair cycle IEP Predict GO terms from Neighborhoods
BP GO:0043010 camera-type eye development IEP Predict GO terms from Neighborhoods
BP GO:0043201 response to leucine IEP Predict GO terms from Neighborhoods
BP GO:0043588 skin development IEP Predict GO terms from Neighborhoods
BP GO:0043616 keratinocyte proliferation IEP Predict GO terms from Neighborhoods
MF GO:0043849 Ras palmitoyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0044347 cell wall polysaccharide catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0044853 plasma membrane raft IEP Predict GO terms from Neighborhoods
CC GO:0045179 apical cortex IEP Predict GO terms from Neighborhoods
BP GO:0045604 regulation of epidermal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045606 positive regulation of epidermal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045667 regulation of osteoblast differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045668 negative regulation of osteoblast differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045682 regulation of epidermis development IEP Predict GO terms from Neighborhoods
BP GO:0045684 positive regulation of epidermis development IEP Predict GO terms from Neighborhoods
BP GO:0045879 negative regulation of smoothened signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0046658 anchored component of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0048104 establishment of body hair or bristle planar orientation IEP Predict GO terms from Neighborhoods
BP GO:0048229 gametophyte development IEP Predict GO terms from Neighborhoods
BP GO:0048317 seed morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048437 floral organ development IEP Predict GO terms from Neighborhoods
BP GO:0048441 petal development IEP Predict GO terms from Neighborhoods
BP GO:0048609 multicellular organismal reproductive process IEP Predict GO terms from Neighborhoods
BP GO:0048634 regulation of muscle organ development IEP Predict GO terms from Neighborhoods
BP GO:0048635 negative regulation of muscle organ development IEP Predict GO terms from Neighborhoods
BP GO:0048745 smooth muscle tissue development IEP Predict GO terms from Neighborhoods
BP GO:0048754 branching morphogenesis of an epithelial tube IEP Predict GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Predict GO terms from Neighborhoods
BP GO:0048863 stem cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0050673 epithelial cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0050678 regulation of epithelial cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0050680 negative regulation of epithelial cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0050801 ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0051026 chiasma assembly IEP Predict GO terms from Neighborhoods
MF GO:0051139 metal cation:proton antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:0051275 beta-glucan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051302 regulation of cell division IEP Predict GO terms from Neighborhoods
BP GO:0051321 meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051704 obsolete multi-organism process IEP Predict GO terms from Neighborhoods
BP GO:0051782 negative regulation of cell division IEP Predict GO terms from Neighborhoods
BP GO:0055065 metal ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055067 monovalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055073 cadmium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055075 potassium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055078 sodium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055080 cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0060037 pharyngeal system development IEP Predict GO terms from Neighborhoods
BP GO:0060537 muscle tissue development IEP Predict GO terms from Neighborhoods
BP GO:0060562 epithelial tube morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0060603 mammary gland duct morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0060606 tube closure IEP Predict GO terms from Neighborhoods
BP GO:0060644 mammary gland epithelial cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0060831 smoothened signaling pathway involved in dorsal/ventral neural tube patterning IEP Predict GO terms from Neighborhoods
BP GO:0061005 cell differentiation involved in kidney development IEP Predict GO terms from Neighborhoods
BP GO:0061053 somite development IEP Predict GO terms from Neighborhoods
BP GO:0061138 morphogenesis of a branching epithelium IEP Predict GO terms from Neighborhoods
BP GO:0061687 detoxification of inorganic compound IEP Predict GO terms from Neighborhoods
BP GO:0065001 specification of axis polarity IEP Predict GO terms from Neighborhoods
BP GO:0070723 response to cholesterol IEP Predict GO terms from Neighborhoods
BP GO:0071397 cellular response to cholesterol IEP Predict GO terms from Neighborhoods
BP GO:0071585 detoxification of cadmium ion IEP Predict GO terms from Neighborhoods
MF GO:0071916 dipeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0072044 collecting duct development IEP Predict GO terms from Neighborhoods
BP GO:0072111 cell proliferation involved in kidney development IEP Predict GO terms from Neighborhoods
BP GO:0072203 cell proliferation involved in metanephros development IEP Predict GO terms from Neighborhoods
BP GO:0072205 metanephric collecting duct development IEP Predict GO terms from Neighborhoods
BP GO:0072657 protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:0080052 response to histidine IEP Predict GO terms from Neighborhoods
BP GO:0080053 response to phenylalanine IEP Predict GO terms from Neighborhoods
BP GO:0090708 specification of plant organ axis polarity IEP Predict GO terms from Neighborhoods
MF GO:0097108 hedgehog family protein binding IEP Predict GO terms from Neighborhoods
BP GO:0097485 neuron projection guidance IEP Predict GO terms from Neighborhoods
BP GO:0098754 detoxification IEP Predict GO terms from Neighborhoods
BP GO:0098771 inorganic ion homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0099738 cell cortex region IEP Predict GO terms from Neighborhoods
BP GO:1903224 regulation of endodermal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:1905954 positive regulation of lipid localization IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002022 Pec_lyase 144 230
IPR011050 Pectin_lyase_fold/virulence 63 342
No external refs found!