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  5. SOLTUB.AGRIA.G00000020125

SOLTUB.AGRIA.G00000020125


Description : CAI-1 autoinducer sensor kinase/phosphatase cqsS isoform 1


Gene families : OG_02_0019887 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000020125
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_221


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000002 mitochondrial genome maintenance IEP Predict GO terms from Neighborhoods
BP GO:0000018 regulation of DNA recombination IEP Predict GO terms from Neighborhoods
MF GO:0000217 DNA secondary structure binding IEP Predict GO terms from Neighborhoods
BP GO:0000959 mitochondrial RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0002683 negative regulation of immune system process IEP Predict GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Predict GO terms from Neighborhoods
MF GO:0003680 minor groove of adenine-thymine-rich DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003697 single-stranded DNA binding IEP Predict GO terms from Neighborhoods
CC GO:0005739 mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006479 protein methylation IEP Predict GO terms from Neighborhoods
MF GO:0008170 N-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0008213 protein alkylation IEP Predict GO terms from Neighborhoods
MF GO:0008276 protein methyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0009295 nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0009508 plastid chromosome IEP Predict GO terms from Neighborhoods
BP GO:0009640 photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009647 skotomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Predict GO terms from Neighborhoods
BP GO:0010208 pollen wall assembly IEP Predict GO terms from Neighborhoods
BP GO:0010528 regulation of transposition IEP Predict GO terms from Neighborhoods
BP GO:0010529 negative regulation of transposition IEP Predict GO terms from Neighborhoods
CC GO:0012505 endomembrane system IEP Predict GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016273 arginine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016274 protein-arginine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0018195 peptidyl-arginine modification IEP Predict GO terms from Neighborhoods
BP GO:0018216 peptidyl-arginine methylation IEP Predict GO terms from Neighborhoods
BP GO:0019918 peptidyl-arginine methylation, to symmetrical-dimethyl arginine IEP Predict GO terms from Neighborhoods
BP GO:0022900 electron transport chain IEP Predict GO terms from Neighborhoods
BP GO:0022904 respiratory electron transport chain IEP Predict GO terms from Neighborhoods
BP GO:0031057 negative regulation of histone modification IEP Predict GO terms from Neighborhoods
BP GO:0031058 positive regulation of histone modification IEP Predict GO terms from Neighborhoods
BP GO:0031060 regulation of histone methylation IEP Predict GO terms from Neighborhoods
BP GO:0031062 positive regulation of histone methylation IEP Predict GO terms from Neighborhoods
MF GO:0031490 chromatin DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0035065 regulation of histone acetylation IEP Predict GO terms from Neighborhoods
BP GO:0035067 negative regulation of histone acetylation IEP Predict GO terms from Neighborhoods
MF GO:0035243 protein-arginine omega-N symmetric methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0035246 peptidyl-arginine N-methylation IEP Predict GO terms from Neighborhoods
BP GO:0035247 peptidyl-arginine omega-N-methylation IEP Predict GO terms from Neighborhoods
CC GO:0042644 chloroplast nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0042646 plastid nucleoid IEP Predict GO terms from Neighborhoods
BP GO:0042773 ATP synthesis coupled electron transport IEP Predict GO terms from Neighborhoods
BP GO:0042775 mitochondrial ATP synthesis coupled electron transport IEP Predict GO terms from Neighborhoods
MF GO:0042826 histone deacetylase binding IEP Predict GO terms from Neighborhoods
CC GO:0043226 organelle IEP Predict GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Predict GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Predict GO terms from Neighborhoods
BP GO:0045824 negative regulation of innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0045910 negative regulation of DNA recombination IEP Predict GO terms from Neighborhoods
BP GO:0050777 negative regulation of immune response IEP Predict GO terms from Neighborhoods
BP GO:0051053 negative regulation of DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051570 regulation of histone H3-K9 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051574 positive regulation of histone H3-K9 methylation IEP Predict GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0140053 mitochondrial gene expression IEP Predict GO terms from Neighborhoods
BP GO:1900109 regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900111 positive regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900425 negative regulation of defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:1901983 regulation of protein acetylation IEP Predict GO terms from Neighborhoods
BP GO:1901984 negative regulation of protein acetylation IEP Predict GO terms from Neighborhoods
BP GO:2000756 regulation of peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
BP GO:2000757 negative regulation of peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 108 271
No external refs found!