SOLTUB.AGRIA.G00000020356

Description : Ypt/Rab-GAP domain of gyp1p superfamily protein

Gene families : OG_02_0009330 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000020356
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_636

Type	GO Term	Name	Evidence	Source
BP	GO:0001919	regulation of receptor recycling	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005096	GTPase activator activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005768	endosome	None	Extended
CC	GO:0005769	early endosome	IEA	AHRD
CC	GO:0005773	vacuole	None	Extended
CC	GO:0005776	autophagosome	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006810	transport	None	Extended
MF	GO:0008047	enzyme activator activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009894	regulation of catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010506	regulation of autophagy	None	Extended
CC	GO:0016020	membrane	IEA	AHRD
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0016197	endosomal transport	None	Extended
BP	GO:0016241	regulation of macroautophagy	None	Extended
BP	GO:0016482	cytosolic transport	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
MF	GO:0031267	small GTPase binding	IEA	AHRD
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031329	regulation of cellular catabolic process	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0034499	late endosome to Golgi transport	IEA	AHRD
BP	GO:0042147	retrograde transport, endosome to Golgi	None	Extended
CC	GO:0042470	melanosome	IEA	AHRD
BP	GO:0043085	positive regulation of catalytic activity	None	Extended
BP	GO:0043087	regulation of GTPase activity	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043244	regulation of protein-containing complex disassembly	None	Extended
BP	GO:0043547	positive regulation of GTPase activity	IEA	AHRD
BP	GO:0044093	positive regulation of molecular function	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
CC	GO:0048770	pigment granule	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
MF	GO:0051020	GTPase binding	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051336	regulation of hydrolase activity	None	Extended
BP	GO:0051345	positive regulation of hydrolase activity	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901096	regulation of autophagosome maturation	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR035969	Rab-GTPase_TBC_sf	289	452
IPR000195	Rab-GTPase-TBC_dom	195	358
IPR035969	Rab-GTPase_TBC_sf	98	312

External Links

No external refs found!

SOLTUB.AGRIA.G00000020356

Expression Profile

Co-expression Networks

Functional Annotation