SOLTUB.AGRIA.G00000020594

Description : Telomere repeat-binding protein 1

Gene families : OG_02_0006134 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000020594
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_643

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	None	Extended
CC	GO:0000781	chromosome, telomeric region	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003691	double-stranded telomeric DNA binding	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008301	DNA binding, bending	IEA	AHRD
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009873	ethylene-activated signaling pathway	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
CC	GO:0031965	nuclear membrane	IEA	AHRD
BP	GO:0032204	regulation of telomere maintenance	IEA	AHRD
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0033044	regulation of chromosome organization	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
MF	GO:0042162	telomeric DNA binding	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IEA	AHRD
MF	GO:0043565	sequence-specific DNA binding	None	Extended
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051052	regulation of DNA metabolic process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0098687	chromosomal region	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR029071	Ubiquitin-like_domsf	393	485
IPR009057	Homeobox-like_sf	595	676

External Links

No external refs found!

SOLTUB.AGRIA.G00000020594

Expression Profile

Co-expression Networks

Functional Annotation