SOLTUB.AGRIA.G00000021034


Description : Unknown protein


Gene families : OG_02_0032785 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000021034
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_46


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000083 regulation of transcription involved in G1/S transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
CC GO:0000228 nuclear chromosome IEP Predict GO terms from Neighborhoods
CC GO:0000307 cyclin-dependent protein kinase holoenzyme complex IEP Predict GO terms from Neighborhoods
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0000414 regulation of histone H3-K36 methylation IEP Predict GO terms from Neighborhoods
BP GO:0000416 positive regulation of histone H3-K36 methylation IEP Predict GO terms from Neighborhoods
CC GO:0000793 condensed chromosome IEP Predict GO terms from Neighborhoods
CC GO:0000794 condensed nuclear chromosome IEP Predict GO terms from Neighborhoods
MF GO:0000993 RNA polymerase II complex binding IEP Predict GO terms from Neighborhoods
MF GO:0001098 basal transcription machinery binding IEP Predict GO terms from Neighborhoods
MF GO:0001099 basal RNA polymerase II transcription machinery binding IEP Predict GO terms from Neighborhoods
BP GO:0001701 in utero embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0001833 inner cell mass cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0001843 neural tube closure IEP Predict GO terms from Neighborhoods
MF GO:0002039 p53 binding IEP Predict GO terms from Neighborhoods
BP GO:0002574 thrombocyte differentiation IEP Predict GO terms from Neighborhoods
MF GO:0003724 RNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0004521 endoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004540 ribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0005452 solute:inorganic anion antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0006376 mRNA splice site selection IEP Predict GO terms from Neighborhoods
BP GO:0007059 chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0007286 spermatid development IEP Predict GO terms from Neighborhoods
BP GO:0007346 regulation of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0007530 sex determination IEP Predict GO terms from Neighborhoods
BP GO:0007549 dosage compensation IEP Predict GO terms from Neighborhoods
BP GO:0007611 learning or memory IEP Predict GO terms from Neighborhoods
CC GO:0008023 transcription elongation factor complex IEP Predict GO terms from Neighborhoods
CC GO:0008024 cyclin/CDK positive transcription elongation factor complex IEP Predict GO terms from Neighborhoods
MF GO:0008186 ATP-dependent activity, acting on RNA IEP Predict GO terms from Neighborhoods
MF GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0009048 dosage compensation by inactivation of X chromosome IEP Predict GO terms from Neighborhoods
BP GO:0009292 horizontal gene transfer IEP Predict GO terms from Neighborhoods
BP GO:0009294 DNA-mediated transformation IEP Predict GO terms from Neighborhoods
BP GO:0009557 antipodal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0009560 embryo sac egg cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0009696 salicylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009736 cytokinin-activated signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0009927 histidine phosphotransfer kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0010030 positive regulation of seed germination IEP Predict GO terms from Neighborhoods
BP GO:0010036 response to boron-containing substance IEP Predict GO terms from Neighborhoods
MF GO:0010294 abscisic acid glucosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0010363 regulation of plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0010971 positive regulation of G2/M transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
MF GO:0015301 obsolete anion:anion antiporter activity IEP Predict GO terms from Neighborhoods
CC GO:0016604 nuclear body IEP Predict GO terms from Neighborhoods
CC GO:0016607 nuclear speck IEP Predict GO terms from Neighborhoods
BP GO:0019336 phenol-containing compound catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Predict GO terms from Neighborhoods
CC GO:0019908 nuclear cyclin-dependent protein kinase holoenzyme complex IEP Predict GO terms from Neighborhoods
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Predict GO terms from Neighborhoods
BP GO:0022605 mammalian oogenesis stage IEP Predict GO terms from Neighborhoods
BP GO:0030099 myeloid cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0031062 positive regulation of histone methylation IEP Predict GO terms from Neighborhoods
BP GO:0031440 regulation of mRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0032784 regulation of DNA-templated transcription elongation IEP Predict GO terms from Neighborhoods
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP Predict GO terms from Neighborhoods
CC GO:0032806 carboxy-terminal domain protein kinase complex IEP Predict GO terms from Neighborhoods
BP GO:0032968 positive regulation of transcription elongation by RNA polymerase II IEP Predict GO terms from Neighborhoods
MF GO:0033759 flavone synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0034052 positive regulation of plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
MF GO:0034211 GTP-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0034243 regulation of transcription elongation by RNA polymerase II IEP Predict GO terms from Neighborhoods
MF GO:0034458 3'-5' RNA helicase activity IEP Predict GO terms from Neighborhoods
BP GO:0034612 response to tumor necrosis factor IEP Predict GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Predict GO terms from Neighborhoods
MF GO:0034785 salicylate 5-hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0035148 tube formation IEP Predict GO terms from Neighborhoods
BP GO:0035445 borate transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0036002 pre-mRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0043122 regulation of I-kappaB kinase/NF-kappaB signaling IEP Predict GO terms from Neighborhoods
BP GO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling IEP Predict GO terms from Neighborhoods
MF GO:0043175 RNA polymerase core enzyme binding IEP Predict GO terms from Neighborhoods
BP GO:0043388 positive regulation of DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0043424 protein histidine kinase binding IEP Predict GO terms from Neighborhoods
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP Predict GO terms from Neighborhoods
BP GO:0043922 negative regulation by host of viral transcription IEP Predict GO terms from Neighborhoods
BP GO:0043966 histone H3 acetylation IEP Predict GO terms from Neighborhoods
BP GO:0043967 histone H4 acetylation IEP Predict GO terms from Neighborhoods
BP GO:0043983 histone H4-K12 acetylation IEP Predict GO terms from Neighborhoods
BP GO:0044154 histone H3-K14 acetylation IEP Predict GO terms from Neighborhoods
BP GO:0044403 biological process involved in symbiotic interaction IEP Predict GO terms from Neighborhoods
BP GO:0044788 modulation by host of viral process IEP Predict GO terms from Neighborhoods
BP GO:0044794 positive regulation by host of viral process IEP Predict GO terms from Neighborhoods
BP GO:0044827 modulation by host of viral genome replication IEP Predict GO terms from Neighborhoods
BP GO:0044829 positive regulation by host of viral genome replication IEP Predict GO terms from Neighborhoods
BP GO:0045787 positive regulation of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0045931 positive regulation of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0046244 salicylic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046713 borate transport IEP Predict GO terms from Neighborhoods
MF GO:0046715 active borate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0048160 primary follicle stage IEP Predict GO terms from Neighborhoods
BP GO:0048364 root development IEP Predict GO terms from Neighborhoods
BP GO:0048599 oocyte development IEP Predict GO terms from Neighborhoods
BP GO:0048609 multicellular organismal reproductive process IEP Predict GO terms from Neighborhoods
BP GO:0048869 cellular developmental process IEP Predict GO terms from Neighborhoods
BP GO:0050727 regulation of inflammatory response IEP Predict GO terms from Neighborhoods
BP GO:0050890 cognition IEP Predict GO terms from Neighborhoods
BP GO:0051099 positive regulation of binding IEP Predict GO terms from Neighborhoods
BP GO:0051101 regulation of DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0051247 positive regulation of protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051270 obsolete regulation of cellular component movement IEP Predict GO terms from Neighborhoods
BP GO:0051445 regulation of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051446 positive regulation of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051552 flavone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051553 flavone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0051702 biological process involved in interaction with symbiont IEP Predict GO terms from Neighborhoods
BP GO:0051726 regulation of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051728 cell cycle switching, mitotic to meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051729 germline cell cycle switching, mitotic to meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051851 modulation by host of symbiont process IEP Predict GO terms from Neighborhoods
BP GO:0060184 cell cycle switching IEP Predict GO terms from Neighborhoods
BP GO:0060606 tube closure IEP Predict GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Predict GO terms from Neighborhoods
MF GO:0070063 RNA polymerase binding IEP Predict GO terms from Neighborhoods
BP GO:0070555 response to interleukin-1 IEP Predict GO terms from Neighborhoods
MF GO:0070577 lysine-acetylated histone binding IEP Predict GO terms from Neighborhoods
BP GO:0080029 cellular response to boron-containing substance levels IEP Predict GO terms from Neighborhoods
MF GO:0080043 quercetin 3-O-glucosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0080044 quercetin 7-O-glucosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0080135 regulation of cellular response to stress IEP Predict GO terms from Neighborhoods
MF GO:0099122 RNA polymerase II C-terminal domain binding IEP Predict GO terms from Neighborhoods
MF GO:0106140 P-TEFb complex binding IEP Predict GO terms from Neighborhoods
BP GO:0110104 mRNA alternative polyadenylation IEP Predict GO terms from Neighborhoods
MF GO:0140030 modification-dependent protein binding IEP Predict GO terms from Neighborhoods
MF GO:0140033 acetylation-dependent protein binding IEP Predict GO terms from Neighborhoods
MF GO:0140323 solute:anion antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:1900363 regulation of mRNA polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:1901407 regulation of phosphorylation of RNA polymerase II C-terminal domain IEP Predict GO terms from Neighborhoods
BP GO:1901616 organic hydroxy compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901976 regulation of cell cycle checkpoint IEP Predict GO terms from Neighborhoods
BP GO:1901977 negative regulation of cell cycle checkpoint IEP Predict GO terms from Neighborhoods
BP GO:1901989 positive regulation of cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901992 positive regulation of mitotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
CC GO:1902554 serine/threonine protein kinase complex IEP Predict GO terms from Neighborhoods
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902751 positive regulation of cell cycle G2/M phase transition IEP Predict GO terms from Neighborhoods
CC GO:1902911 protein kinase complex IEP Predict GO terms from Neighborhoods
MF GO:1990247 N6-methyladenosine-containing RNA binding IEP Predict GO terms from Neighborhoods
BP GO:2000001 regulation of DNA damage checkpoint IEP Predict GO terms from Neighborhoods
BP GO:2000002 negative regulation of DNA damage checkpoint IEP Predict GO terms from Neighborhoods
BP GO:2000031 regulation of salicylic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2000736 regulation of stem cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:2001021 negative regulation of response to DNA damage stimulus IEP Predict GO terms from Neighborhoods
BP GO:2001253 regulation of histone H3-K36 trimethylation IEP Predict GO terms from Neighborhoods
BP GO:2001255 positive regulation of histone H3-K36 trimethylation IEP Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!