SOLTUB.AGRIA.G00000021216


Description : Basic helix-loop-helix transcription factor


Gene families : OG_02_0015146 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000021216
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_233


Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEA AHRD
MF GO:0003700 DNA-binding transcription factor activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
BP GO:0006355 regulation of DNA-templated transcription IEA AHRD
CC GO:0009506 plasmodesma IEA AHRD
BP GO:0009567 double fertilization forming a zygote and endosperm IEA AHRD
BP GO:0009611 response to wounding IEA AHRD
BP GO:0009637 response to blue light IEA AHRD
BP GO:0009704 de-etiolation IEA AHRD
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEA AHRD
BP GO:0009737 response to abscisic acid IEA AHRD
CC GO:0009941 chloroplast envelope IEA AHRD
BP GO:0009959 negative gravitropism IEA AHRD
BP GO:0010187 negative regulation of seed germination IEA AHRD
BP GO:0010200 response to chitin IEA AHRD
BP GO:0010218 response to far red light IEA AHRD
BP GO:0010629 negative regulation of gene expression IEA AHRD
BP GO:0016036 cellular response to phosphate starvation IEA AHRD
BP GO:0042538 hyperosmotic salinity response IEA AHRD
BP GO:0080147 root hair cell development IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000904 cell morphogenesis involved in differentiation IEP Predict GO terms from Neighborhoods
BP GO:0001523 retinoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0003006 developmental process involved in reproduction IEP Predict GO terms from Neighborhoods
BP GO:0003016 respiratory system process IEP Predict GO terms from Neighborhoods
MF GO:0004022 alcohol dehydrogenase (NAD+) activity IEP Predict GO terms from Neighborhoods
MF GO:0004175 endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004252 serine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004552 octanol dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0005262 calcium channel activity IEP Predict GO terms from Neighborhoods
CC GO:0005615 extracellular space IEP Predict GO terms from Neighborhoods
BP GO:0006012 galactose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006244 pyrimidine nucleotide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006253 dCTP catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006820 anion transport IEP Predict GO terms from Neighborhoods
BP GO:0007632 visual behavior IEP Predict GO terms from Neighborhoods
BP GO:0008217 regulation of blood pressure IEP Predict GO terms from Neighborhoods
MF GO:0008236 serine-type peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0008306 associative learning IEP Predict GO terms from Neighborhoods
MF GO:0008324 cation transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0008378 galactosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008381 mechanosensitive ion channel activity IEP Predict GO terms from Neighborhoods
MF GO:0008408 3'-5' exonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0008509 anion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0008542 visual learning IEP Predict GO terms from Neighborhoods
BP GO:0009143 nucleoside triphosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009147 pyrimidine nucleoside triphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009149 pyrimidine nucleoside triphosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009211 pyrimidine deoxyribonucleoside triphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009213 pyrimidine deoxyribonucleoside triphosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009219 pyrimidine deoxyribonucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009223 pyrimidine deoxyribonucleotide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009264 deoxyribonucleotide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009299 mRNA transcription IEP Predict GO terms from Neighborhoods
BP GO:0009312 oligosaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009682 induced systemic resistance IEP Predict GO terms from Neighborhoods
BP GO:0009700 indole phytoalexin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009733 response to auxin IEP Predict GO terms from Neighborhoods
BP GO:0009826 unidimensional cell growth IEP Predict GO terms from Neighborhoods
BP GO:0009860 pollen tube growth IEP Predict GO terms from Neighborhoods
BP GO:0009932 cell tip growth IEP Predict GO terms from Neighborhoods
BP GO:0009942 longitudinal axis specification IEP Predict GO terms from Neighborhoods
BP GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid IEP Predict GO terms from Neighborhoods
BP GO:0010015 root morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010018 far-red light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010055 atrichoblast differentiation IEP Predict GO terms from Neighborhoods
BP GO:0010074 maintenance of meristem identity IEP Predict GO terms from Neighborhoods
BP GO:0010098 suspensor development IEP Predict GO terms from Neighborhoods
BP GO:0010101 post-embryonic root morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010102 lateral root morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010120 camalexin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010161 red light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEP Predict GO terms from Neighborhoods
BP GO:0010325 raffinose family oligosaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0010334 sesquiterpene synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0010929 positive regulation of auxin mediated signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0015075 ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015175 neutral amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015186 L-glutamine transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015334 high-affinity oligopeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015772 oligosaccharide transport IEP Predict GO terms from Neighborhoods
BP GO:0015773 raffinose transport IEP Predict GO terms from Neighborhoods
BP GO:0015800 acidic amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015813 L-glutamate transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0016106 sesquiterpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0016657 oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0017171 serine hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0018455 alcohol dehydrogenase [NAD(P)+] activity IEP Predict GO terms from Neighborhoods
MF GO:0019103 pyrimidine nucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0019692 deoxyribose phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019827 stem cell population maintenance IEP Predict GO terms from Neighborhoods
BP GO:0030010 establishment of cell polarity IEP Predict GO terms from Neighborhoods
CC GO:0031012 extracellular matrix IEP Predict GO terms from Neighborhoods
BP GO:0032501 multicellular organismal process IEP Predict GO terms from Neighborhoods
MF GO:0032552 deoxyribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032556 pyrimidine deoxyribonucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0032973 amino acid export across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0033383 geranyl diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034220 ion transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0034639 L-amino acid efflux transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0035250 UDP-galactosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0036473 cell death in response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0042262 DNA protection IEP Predict GO terms from Neighborhoods
MF GO:0042802 identical protein binding IEP Predict GO terms from Neighborhoods
MF GO:0042937 tripeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0042939 tripeptide transport IEP Predict GO terms from Neighborhoods
BP GO:0045338 farnesyl diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045777 positive regulation of blood pressure IEP Predict GO terms from Neighborhoods
BP GO:0045892 negative regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0046065 dCTP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046185 aldehyde catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046217 indole phytoalexin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046292 formaldehyde metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046294 formaldehyde catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046386 deoxyribose phosphate catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0047216 inositol 3-alpha-galactosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0047461 (+)-delta-cadinene synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0047840 dCTP diphosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0048437 floral organ development IEP Predict GO terms from Neighborhoods
BP GO:0048441 petal development IEP Predict GO terms from Neighborhoods
BP GO:0048442 sepal development IEP Predict GO terms from Neighborhoods
BP GO:0048480 stigma development IEP Predict GO terms from Neighborhoods
BP GO:0048576 positive regulation of short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048577 negative regulation of short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048588 developmental cell growth IEP Predict GO terms from Neighborhoods
BP GO:0048832 specification of plant organ number IEP Predict GO terms from Neighborhoods
BP GO:0048833 specification of floral organ number IEP Predict GO terms from Neighborhoods
BP GO:0048834 specification of petal number IEP Predict GO terms from Neighborhoods
BP GO:0050982 detection of mechanical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0051253 negative regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051409 response to nitrosative stress IEP Predict GO terms from Neighborhoods
MF GO:0051903 S-(hydroxymethyl)glutathione dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0051938 L-glutamate import IEP Predict GO terms from Neighborhoods
BP GO:0052317 camalexin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0052575 carbohydrate localization IEP Predict GO terms from Neighborhoods
BP GO:0052576 carbohydrate storage IEP Predict GO terms from Neighborhoods
BP GO:0070370 cellular heat acclimation IEP Predict GO terms from Neighborhoods
BP GO:0071465 cellular response to desiccation IEP Predict GO terms from Neighborhoods
BP GO:0071490 cellular response to far red light IEP Predict GO terms from Neighborhoods
BP GO:0071491 cellular response to red light IEP Predict GO terms from Neighborhoods
MF GO:0071916 dipeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0080007 S-nitrosoglutathione reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0080054 low-affinity nitrate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0080144 amino acid homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0089718 amino acid import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0090377 seed trichome initiation IEP Predict GO terms from Neighborhoods
BP GO:0090408 phloem nitrate loading IEP Predict GO terms from Neighborhoods
MF GO:0090448 glucosinolate:proton symporter activity IEP Predict GO terms from Neighborhoods
BP GO:0090449 phloem glucosinolate loading IEP Predict GO terms from Neighborhoods
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0090698 post-embryonic plant morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0097468 programmed cell death in response to reactive oxygen species IEP Predict GO terms from Neighborhoods
BP GO:0097501 stress response to metal ion IEP Predict GO terms from Neighborhoods
BP GO:0098656 anion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0098712 L-glutamate import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0098727 maintenance of cell number IEP Predict GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Predict GO terms from Neighborhoods
MF GO:0102311 8-hydroxygeraniol dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0110095 cellular detoxification of aldehyde IEP Predict GO terms from Neighborhoods
BP GO:0110126 phloem loading IEP Predict GO terms from Neighborhoods
BP GO:1901349 glucosinolate transport IEP Predict GO terms from Neighborhoods
BP GO:1901926 cadinene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901928 cadinene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902475 L-alpha-amino acid transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1904368 regulation of sclerenchyma cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:1904369 positive regulation of sclerenchyma cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:1990170 stress response to cadmium ion IEP Predict GO terms from Neighborhoods
BP GO:2000169 regulation of peptidyl-cysteine S-nitrosylation IEP Predict GO terms from Neighborhoods
BP GO:2001088 trisaccharide transport IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011598 bHLH_dom 53 99
IPR036638 HLH_DNA-bd_sf 53 111
No external refs found!