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  5. SOLTUB.AGRIA.G00000021275

SOLTUB.AGRIA.G00000021275


Description : Ca(2+)-dependent nuclease family protein


Gene families : OG_02_0015159 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000021275
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_124


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA AHRD
MF GO:0004520 endodeoxyribonuclease activity IEA AHRD
MF GO:0004521 endoribonuclease activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0006308 DNA catabolic process IEA AHRD
BP GO:0006401 RNA catabolic process IEA AHRD
MF GO:0046872 metal ion binding IEA AHRD
BP GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000018 regulation of DNA recombination IEP Predict GO terms from Neighborhoods
CC GO:0000346 transcription export complex IEP Predict GO terms from Neighborhoods
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predict GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predict GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0000781 chromosome, telomeric region IEP Predict GO terms from Neighborhoods
BP GO:0000910 cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0000911 cytokinesis by cell plate formation IEP Predict GO terms from Neighborhoods
CC GO:0000922 spindle pole IEP Predict GO terms from Neighborhoods
MF GO:0003697 single-stranded DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003924 GTPase activity IEP Predict GO terms from Neighborhoods
MF GO:0004180 carboxypeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Predict GO terms from Neighborhoods
CC GO:0005681 spliceosomal complex IEP Predict GO terms from Neighborhoods
CC GO:0005770 late endosome IEP Predict GO terms from Neighborhoods
CC GO:0005771 multivesicular body IEP Predict GO terms from Neighborhoods
CC GO:0005813 centrosome IEP Predict GO terms from Neighborhoods
CC GO:0005828 kinetochore microtubule IEP Predict GO terms from Neighborhoods
CC GO:0005876 spindle microtubule IEP Predict GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006405 RNA export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006406 mRNA export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006869 lipid transport IEP Predict GO terms from Neighborhoods
BP GO:0006887 exocytosis IEP Predict GO terms from Neighborhoods
BP GO:0006913 nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0007032 endosome organization IEP Predict GO terms from Neighborhoods
BP GO:0007051 spindle organization IEP Predict GO terms from Neighborhoods
BP GO:0007052 mitotic spindle organization IEP Predict GO terms from Neighborhoods
BP GO:0007080 mitotic metaphase plate congression IEP Predict GO terms from Neighborhoods
MF GO:0008017 microtubule binding IEP Predict GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008238 exopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Predict GO terms from Neighborhoods
CC GO:0009504 cell plate IEP Predict GO terms from Neighborhoods
CC GO:0010008 endosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP Predict GO terms from Neighborhoods
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0010632 regulation of epithelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010634 positive regulation of epithelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010720 positive regulation of cell development IEP Predict GO terms from Neighborhoods
BP GO:0010796 regulation of multivesicular body size IEP Predict GO terms from Neighborhoods
BP GO:0010971 positive regulation of G2/M transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0010975 regulation of neuron projection development IEP Predict GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Predict GO terms from Neighborhoods
BP GO:0015850 organic hydroxy compound transport IEP Predict GO terms from Neighborhoods
BP GO:0015918 sterol transport IEP Predict GO terms from Neighborhoods
BP GO:0015931 nucleobase-containing compound transport IEP Predict GO terms from Neighborhoods
BP GO:0016050 vesicle organization IEP Predict GO terms from Neighborhoods
BP GO:0016197 endosomal transport IEP Predict GO terms from Neighborhoods
CC GO:0016604 nuclear body IEP Predict GO terms from Neighborhoods
CC GO:0016607 nuclear speck IEP Predict GO terms from Neighborhoods
MF GO:0016807 cysteine-type carboxypeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Predict GO terms from Neighborhoods
MF GO:0017022 myosin binding IEP Predict GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0019783 ubiquitin-like protein peptidase activity IEP Predict GO terms from Neighborhoods
CC GO:0030133 transport vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030139 endocytic vesicle IEP Predict GO terms from Neighborhoods
BP GO:0030301 cholesterol transport IEP Predict GO terms from Neighborhoods
BP GO:0030307 positive regulation of cell growth IEP Predict GO terms from Neighborhoods
BP GO:0030334 regulation of cell migration IEP Predict GO terms from Neighborhoods
BP GO:0030335 positive regulation of cell migration IEP Predict GO terms from Neighborhoods
CC GO:0030424 axon IEP Predict GO terms from Neighborhoods
BP GO:0030516 regulation of axon extension IEP Predict GO terms from Neighborhoods
BP GO:0030953 astral microtubule organization IEP Predict GO terms from Neighborhoods
BP GO:0031122 cytoplasmic microtubule organization IEP Predict GO terms from Neighborhoods
BP GO:0031344 regulation of cell projection organization IEP Predict GO terms from Neighborhoods
BP GO:0031346 positive regulation of cell projection organization IEP Predict GO terms from Neighborhoods
MF GO:0031489 myosin V binding IEP Predict GO terms from Neighborhoods
MF GO:0031493 obsolete nucleosomal histone binding IEP Predict GO terms from Neighborhoods
BP GO:0031503 protein-containing complex localization IEP Predict GO terms from Neighborhoods
MF GO:0031593 polyubiquitin modification-dependent protein binding IEP Predict GO terms from Neighborhoods
CC GO:0031901 early endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0032154 cleavage furrow IEP Predict GO terms from Neighborhoods
BP GO:0032365 intracellular lipid transport IEP Predict GO terms from Neighborhoods
BP GO:0032366 intracellular sterol transport IEP Predict GO terms from Neighborhoods
BP GO:0032367 intracellular cholesterol transport IEP Predict GO terms from Neighborhoods
BP GO:0032400 melanosome localization IEP Predict GO terms from Neighborhoods
BP GO:0032401 establishment of melanosome localization IEP Predict GO terms from Neighborhoods
BP GO:0032402 melanosome transport IEP Predict GO terms from Neighborhoods
BP GO:0032456 endocytic recycling IEP Predict GO terms from Neighborhoods
BP GO:0032465 regulation of cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0032535 regulation of cellular component size IEP Predict GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Predict GO terms from Neighborhoods
CC GO:0032588 trans-Golgi network membrane IEP Predict GO terms from Neighborhoods
BP GO:0032940 secretion by cell IEP Predict GO terms from Neighborhoods
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034394 protein localization to cell surface IEP Predict GO terms from Neighborhoods
CC GO:0035145 exon-exon junction complex IEP Predict GO terms from Neighborhoods
BP GO:0035418 protein localization to synapse IEP Predict GO terms from Neighborhoods
CC GO:0035770 ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
BP GO:0036257 multivesicular body organization IEP Predict GO terms from Neighborhoods
BP GO:0036258 multivesicular body assembly IEP Predict GO terms from Neighborhoods
MF GO:0036435 K48-linked polyubiquitin modification-dependent protein binding IEP Predict GO terms from Neighborhoods
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
BP GO:0040012 regulation of locomotion IEP Predict GO terms from Neighborhoods
BP GO:0040017 positive regulation of locomotion IEP Predict GO terms from Neighborhoods
CC GO:0043230 extracellular organelle IEP Predict GO terms from Neighborhoods
BP GO:0044417 translocation of molecules into host IEP Predict GO terms from Neighborhoods
BP GO:0045056 transcytosis IEP Predict GO terms from Neighborhoods
CC GO:0045335 phagocytic vesicle IEP Predict GO terms from Neighborhoods
BP GO:0045597 positive regulation of cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045727 positive regulation of translation IEP Predict GO terms from Neighborhoods
BP GO:0045773 positive regulation of axon extension IEP Predict GO terms from Neighborhoods
BP GO:0045787 positive regulation of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0045927 positive regulation of growth IEP Predict GO terms from Neighborhoods
BP GO:0045931 positive regulation of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0046784 viral mRNA export from host cell nucleus IEP Predict GO terms from Neighborhoods
BP GO:0046903 secretion IEP Predict GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0048167 regulation of synaptic plasticity IEP Predict GO terms from Neighborhoods
BP GO:0048168 regulation of neuronal synaptic plasticity IEP Predict GO terms from Neighborhoods
BP GO:0048169 regulation of long-term neuronal synaptic plasticity IEP Predict GO terms from Neighborhoods
BP GO:0048639 positive regulation of developmental growth IEP Predict GO terms from Neighborhoods
BP GO:0050000 chromosome localization IEP Predict GO terms from Neighborhoods
BP GO:0050657 nucleic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0050658 RNA transport IEP Predict GO terms from Neighborhoods
BP GO:0050767 regulation of neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050769 positive regulation of neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050770 regulation of axonogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050772 positive regulation of axonogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050804 modulation of chemical synaptic transmission IEP Predict GO terms from Neighborhoods
BP GO:0051028 mRNA transport IEP Predict GO terms from Neighborhoods
BP GO:0051036 regulation of endosome size IEP Predict GO terms from Neighborhoods
BP GO:0051168 nuclear export IEP Predict GO terms from Neighborhoods
BP GO:0051169 nuclear transport IEP Predict GO terms from Neighborhoods
BP GO:0051223 regulation of protein transport IEP Predict GO terms from Neighborhoods
BP GO:0051225 spindle assembly IEP Predict GO terms from Neighborhoods
BP GO:0051236 establishment of RNA localization IEP Predict GO terms from Neighborhoods
BP GO:0051302 regulation of cell division IEP Predict GO terms from Neighborhoods
BP GO:0051303 establishment of chromosome localization IEP Predict GO terms from Neighborhoods
BP GO:0051310 metaphase plate congression IEP Predict GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Predict GO terms from Neighborhoods
BP GO:0051648 vesicle localization IEP Predict GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Predict GO terms from Neighborhoods
BP GO:0051650 establishment of vesicle localization IEP Predict GO terms from Neighborhoods
BP GO:0051656 establishment of organelle localization IEP Predict GO terms from Neighborhoods
BP GO:0051701 biological process involved in interaction with host IEP Predict GO terms from Neighborhoods
BP GO:0051875 pigment granule localization IEP Predict GO terms from Neighborhoods
BP GO:0051904 pigment granule transport IEP Predict GO terms from Neighborhoods
BP GO:0051905 establishment of pigment granule localization IEP Predict GO terms from Neighborhoods
BP GO:0051960 regulation of nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0051962 positive regulation of nervous system development IEP Predict GO terms from Neighborhoods
CC GO:0055037 recycling endosome IEP Predict GO terms from Neighborhoods
BP GO:0060284 regulation of cell development IEP Predict GO terms from Neighborhoods
BP GO:0060627 regulation of vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0061387 regulation of extent of cell growth IEP Predict GO terms from Neighborhoods
BP GO:0061951 establishment of protein localization to plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:0062153 C5-methylcytidine-containing RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0062237 protein localization to postsynapse IEP Predict GO terms from Neighborhoods
CC GO:0065010 extracellular membrane-bounded organelle IEP Predict GO terms from Neighborhoods
MF GO:0070004 cysteine-type exopeptidase activity IEP Predict GO terms from Neighborhoods
CC GO:0070062 extracellular exosome IEP Predict GO terms from Neighborhoods
BP GO:0070201 regulation of establishment of protein localization IEP Predict GO terms from Neighborhoods
MF GO:0070530 K63-linked polyubiquitin modification-dependent protein binding IEP Predict GO terms from Neighborhoods
CC GO:0071013 catalytic step 2 spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Predict GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Predict GO terms from Neighborhoods
MF GO:0071795 K11-linked polyubiquitin modification-dependent protein binding IEP Predict GO terms from Neighborhoods
MF GO:0071796 K6-linked polyubiquitin modification-dependent protein binding IEP Predict GO terms from Neighborhoods
BP GO:0072657 protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:0072659 protein localization to plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0090066 regulation of anatomical structure size IEP Predict GO terms from Neighborhoods
BP GO:0090068 positive regulation of cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:0090150 establishment of protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:0090307 mitotic spindle assembly IEP Predict GO terms from Neighborhoods
BP GO:0097120 receptor localization to synapse IEP Predict GO terms from Neighborhoods
BP GO:0097242 amyloid-beta clearance IEP Predict GO terms from Neighborhoods
BP GO:0097435 supramolecular fiber organization IEP Predict GO terms from Neighborhoods
BP GO:0097494 regulation of vesicle size IEP Predict GO terms from Neighborhoods
CC GO:0098685 Schaffer collateral - CA1 synapse IEP Predict GO terms from Neighborhoods
CC GO:0098687 chromosomal region IEP Predict GO terms from Neighborhoods
CC GO:0098837 postsynaptic recycling endosome IEP Predict GO terms from Neighborhoods
CC GO:0098845 postsynaptic endosome IEP Predict GO terms from Neighborhoods
BP GO:0098876 vesicle-mediated transport to the plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0098877 neurotransmitter receptor transport to plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0098887 neurotransmitter receptor transport, endosome to postsynaptic membrane IEP Predict GO terms from Neighborhoods
BP GO:0098969 neurotransmitter receptor transport to postsynaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0098978 glutamatergic synapse IEP Predict GO terms from Neighborhoods
BP GO:0099003 vesicle-mediated transport in synapse IEP Predict GO terms from Neighborhoods
BP GO:0099072 regulation of postsynaptic membrane neurotransmitter receptor levels IEP Predict GO terms from Neighborhoods
CC GO:0099080 supramolecular complex IEP Predict GO terms from Neighborhoods
BP GO:0099177 regulation of trans-synaptic signaling IEP Predict GO terms from Neighborhoods
BP GO:0099637 neurotransmitter receptor transport IEP Predict GO terms from Neighborhoods
BP GO:0099638 endosome to plasma membrane protein transport IEP Predict GO terms from Neighborhoods
BP GO:0099639 neurotransmitter receptor transport, endosome to plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Predict GO terms from Neighborhoods
BP GO:0120035 regulation of plasma membrane bounded cell projection organization IEP Predict GO terms from Neighborhoods
MF GO:0140030 modification-dependent protein binding IEP Predict GO terms from Neighborhoods
BP GO:0140694 non-membrane-bounded organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:0150093 amyloid-beta clearance by transcytosis IEP Predict GO terms from Neighborhoods
BP GO:1901989 positive regulation of cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901992 positive regulation of mitotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902414 protein localization to cell junction IEP Predict GO terms from Neighborhoods
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902751 positive regulation of cell cycle G2/M phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902850 microtubule cytoskeleton organization involved in mitosis IEP Predict GO terms from Neighborhoods
BP GO:1903076 regulation of protein localization to plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1903078 positive regulation of protein localization to plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1903539 protein localization to postsynaptic membrane IEP Predict GO terms from Neighborhoods
BP GO:1903540 establishment of protein localization to postsynaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:1903561 extracellular vesicle IEP Predict GO terms from Neighborhoods
BP GO:1903829 positive regulation of protein localization IEP Predict GO terms from Neighborhoods
BP GO:1904375 regulation of protein localization to cell periphery IEP Predict GO terms from Neighborhoods
BP GO:1904377 positive regulation of protein localization to cell periphery IEP Predict GO terms from Neighborhoods
BP GO:1905475 regulation of protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:1905477 positive regulation of protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:1990182 exosomal secretion IEP Predict GO terms from Neighborhoods
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Predict GO terms from Neighborhoods
BP GO:1990778 protein localization to cell periphery IEP Predict GO terms from Neighborhoods
BP GO:2000145 regulation of cell motility IEP Predict GO terms from Neighborhoods
BP GO:2000147 positive regulation of cell motility IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR016071 Staphylococal_nuclease_OB-fold 216 310
No external refs found!