SOLTUB.AGRIA.G00000021462

Description : Glycosyl hydrolase family protein

Gene families : OG_02_0000487 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000021462
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_218

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	None	Extended
CC	GO:0005774	vacuolar membrane	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0009044	xylan 1,4-beta-xylosidase activity	IEA	AHRD
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
CC	GO:0009505	plant-type cell wall	IEA	AHRD
CC	GO:0009506	plasmodesma	IEA	AHRD
CC	GO:0009507	chloroplast	IEA	AHRD
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009627	systemic acquired resistance	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010214	seed coat development	IEA	AHRD
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010410	hemicellulose metabolic process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0031221	arabinan metabolic process	None	Extended
BP	GO:0031222	arabinan catabolic process	IEA	AHRD
BP	GO:0032502	developmental process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044347	cell wall polysaccharide catabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045491	xylan metabolic process	None	Extended
BP	GO:0045493	xylan catabolic process	IEA	AHRD
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEA	AHRD
CC	GO:0048046	apoplast	IEA	AHRD
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097599	xylanase activity	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:2000895	hemicellulose catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0003013	circulatory system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0003018	vascular process in circulatory system	IEP	Predict GO terms from Neighborhoods
MF	GO:0004565	beta-galactosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006857	oligopeptide transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0009826	unidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0009932	cell tip growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0010098	suspensor development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010208	pollen wall assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0010232	vascular transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010233	phloem transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010336	gibberellic acid homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010584	pollen exine formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010927	cellular component assembly involved in morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0015078	proton transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015112	nitrate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015293	symporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015294	solute:cation symporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015295	solute:proton symporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015334	high-affinity oligopeptide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015698	inorganic anion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015706	nitrate transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015833	peptide transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0015925	galactosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016049	cell growth	IEP	Predict GO terms from Neighborhoods
CC	GO:0031981	nuclear lumen	IEP	Predict GO terms from Neighborhoods
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0040007	growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0042886	amide transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0042887	amide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0042937	tripeptide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042938	dipeptide transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0042939	tripeptide transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0043562	cellular response to nitrogen levels	IEP	Predict GO terms from Neighborhoods
CC	GO:0046658	anchored component of plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0048589	developmental growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0055088	lipid homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0071916	dipeptide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0072348	sulfur compound transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0080054	low-affinity nitrate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090408	phloem nitrate loading	IEP	Predict GO terms from Neighborhoods
MF	GO:0090448	glucosinolate:proton symporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090449	phloem glucosinolate loading	IEP	Predict GO terms from Neighborhoods
BP	GO:0098661	inorganic anion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0110126	phloem loading	IEP	Predict GO terms from Neighborhoods
BP	GO:1901264	carbohydrate derivative transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1901349	glucosinolate transport	IEP	Predict GO terms from Neighborhoods
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1902025	nitrate import	IEP	Predict GO terms from Neighborhoods
MF	GO:1904680	peptide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002772	Glyco_hydro_3_C	78	307
IPR036881	Glyco_hydro_3_C_sf	78	310
IPR026891	Fn3-like	375	441

External Links

No external refs found!

SOLTUB.AGRIA.G00000021462

Expression Profile

Co-expression Networks

Functional Annotation